Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2589 |
Symbol | |
ID | 4019106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3099952 |
End bp | 3100596 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956633 |
Product | outer membrane protein W |
Protein accession | YP_563591 |
Protein GI | 91793940 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000746821 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA ACATCACCCT AGCTTTACTT GCAGCAGGTC TTATTACTGC AAGTTTTACT AATGTTGCTC AAGCTCATCA AGCAGGCGAC ATTATCGTCC GTGCTGGTAT AGCAACCGTC GCGCCCAATG AATCTAGCCC TGTGGTTGCC GCCGTGGATG AATTCACTGT GGATACTAAC ACTCAACTAG GGCTTAACTT TGCCTATATG CTGACAGACA GTATAGGAGT CGAATTACTC GCCGCCTCGC CGTTTAGCCA TGACATTTCC CTAGGATCCT TAGGTCAGAT TGCCGAGACT AAGCATTTAC CGCCAACACT AGTGGCCCAG TATTATTTTG GACAAGCCAG CAGCGTAGTG CGTCCTTATA TAGGCCTAGG GCTTAACTAC ACCAATTTCT ATGATAACGA ATTCACCAAT GACTTAAATG GTGCACTCAC CAATTTAAGC ATGACCTCAT CTTGGGGCGT AGCCGCGCAG GTTGGCCTAG ATTATAAGCT GAATAAAGAC TGGTTAGTGA ATGCCTCAGT GTGGTACGCC AAAATCCAAA CCGATGTCAG CTTTGATATG GGCGGCATAG CGCAAAAGGT TGAAACAGAC ATAGATCCTT GGGTTTACAT GGTGAGTGTG GGTTACAGCT TTTAA
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Protein sequence | MNNNITLALL AAGLITASFT NVAQAHQAGD IIVRAGIATV APNESSPVVA AVDEFTVDTN TQLGLNFAYM LTDSIGVELL AASPFSHDIS LGSLGQIAET KHLPPTLVAQ YYFGQASSVV RPYIGLGLNY TNFYDNEFTN DLNGALTNLS MTSSWGVAAQ VGLDYKLNKD WLVNASVWYA KIQTDVSFDM GGIAQKVETD IDPWVYMVSV GYSF
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