| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2559 |
|---|
| Symbol | |
|---|
| ID | 4019076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3062138 |
|---|
| End bp | 3062566 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956603 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563561 |
|---|
| Protein GI | 91793910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AAAACAAACC CTCCTTACTA ACCTTAGTCT TATTAGGAGG CTTCTCAGCC
TATTTAGTCT TTGTTGCTGT GATGTTCAGC AGCTACGATC CTTTGCCCGG TGAAAAAGAT
TGGGATGACA GGCAAGCCTT TAATTTACAA CAGCTCAGCC ATATCAAGTT AGGCCAAAGC
TTAGATGAGA TAGTCACCCT GATGGGGGAA GCCGATTTTG TGGAAGCGAA AACGGTGACA
GGCACGGCGC TACAGATAAT GTATTACCGC ACTCACCACA TCAAAGGCGA TGGCATCACC
ACCAAAGATG AATGCACTCC CCTGTTGTTT GACAATGAGA AGCTCATCGC TTGGGGGCCT
GATACCTATC AGCAGTACCT CAATGCGAAC ATTAGCCTAG CAACGGCCAA TATTGTCTCT
GAACAGTAA
|
|---|
| Protein sequence | MKKKNKPSLL TLVLLGGFSA YLVFVAVMFS SYDPLPGEKD WDDRQAFNLQ QLSHIKLGQS
LDEIVTLMGE ADFVEAKTVT GTALQIMYYR THHIKGDGIT TKDECTPLLF DNEKLIAWGP
DTYQQYLNAN ISLATANIVS EQ
|
|---|
| |