Gene Sden_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2517 
Symbol 
ID4019020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3006818 
End bp3007591 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID637956548 
Productputative sulfate transport protein CysZ 
Protein accessionYP_563520 
Protein GI91793869 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.160746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCG ATGTAAAAAA ACCGAATAAG AGTGGCTTTA ACTACTTTAT GGATGGTTTT 
GCTTTAATTA AACAACCGGG TTTGCGAAGC TTCGTGTTTA TCCCCCTGAT GATTAACTTA
CTGTTATTTG CGACTGTAAT GTATGTTGCC GTCGGCGAAT TGGCGCTGTT ATTTGACTGG
GTCAATGGCC AACTACCAGA CTACTTAACT TGGCTTAAGT TTTTTCTTTG GCCCTTAGCG
GTGCTCAGCC TCTTGGTTAT CATGTCATTT GTGTTTAGCT CGGTAATGAA CTGGCTAGCG
GCACCTTTTA ATGGCCTTTT GGCTGAAAAA GTCGAGCAGC ACCTCACGGG TAAAGCATTA
AACTCAGGTG GCACCCTCGA TTTGGTGAAA GATTTGCCTA GAATTTTTGG CCGTGAATGG
CAAAAACTTA AGTATTATTT ACCCCGCGCC ATTGGCTTTT TAATCTTATT TTGGGTGCCT
GTGGTAGGTC AGACTGTGGC ACCTGTGCTG TGGTTTTTAT TCACAGCCTG GATGATGGCA
GTGCAGTATT GTGATTTCCC CTTCGATAAC CATAAAGTGC CTTTTGAGGA CATGAAGTTT
GCCCTCAACC AGACCAAGGG CACAAGTTAC AGTTTTGGCG CCGCCGTGAC CCTGTTCGCC
ATGATCCCTA TCGTGAACTT TATCGTGATG CCAGTGGCAA TTTGCGGTGC AACTGCCTTA
TGGGTAGACA GGTATAGAGA TGCCTATAAA CACCCGACCA TCGCCAGAGA CTAG
 
Protein sequence
MSSDVKKPNK SGFNYFMDGF ALIKQPGLRS FVFIPLMINL LLFATVMYVA VGELALLFDW 
VNGQLPDYLT WLKFFLWPLA VLSLLVIMSF VFSSVMNWLA APFNGLLAEK VEQHLTGKAL
NSGGTLDLVK DLPRIFGREW QKLKYYLPRA IGFLILFWVP VVGQTVAPVL WFLFTAWMMA
VQYCDFPFDN HKVPFEDMKF ALNQTKGTSY SFGAAVTLFA MIPIVNFIVM PVAICGATAL
WVDRYRDAYK HPTIARD