| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2504 |
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| Symbol | |
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| ID | 4019007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2987836 |
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| End bp | 2989107 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956535 |
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| Product | peptidase M23B |
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| Protein accession | YP_563507 |
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| Protein GI | 91793856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.331029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTAA ACTTGCCAAG AGCAAGTTTG CAAAACTTGC CAAATTTTCA CAAAAAAGTA
TTGATGGCCA GCGTTTTTTT TATGGGTGCA GCCCTATTAT GGCCATCTGA ACAAAGCTTC
TCCCCAGAAC GTATTCCCGT CGCCTTAGAC ATTGAATCCC TATTACCGGA TCTGAGCACT
GGGCCTGTCA CTAAAGTTGC AGCTAAACGT CAACCTTTGT TCGAACATGT CATAGAAACT
GGCGATACCT TAAGTAAATT GTTTGAGCAA GCGGGCATAG ATCAGAAGAC CATGTATAAG
GTGTTGGAGG CGGATTACAG CGTCTTGGCG TTCGATACCT TATTGCCGGG CAACCGTATT
CAGTTTTGGC AGGATAAAAA CGGCGATCTG ACTAAACTAG AATTGTATTT TAATCCTGCC
CATCAAGTGG TATTCACGCG TTTCGATGAT GGCAGTTTTA ATGCCGAAGA AGTGATCCGC
GAAGGGGTAT GGCAAAACCG TGTGGTTGGC GGTGAGATCA ATGGCTCATT CTATGTGTCG
GCTAAACGCG CGGGTTTAAG CGCTACTGAT ATCCAAAAAG TTGAATCTTT ACTGAAAAAT
AAACTGAACT TCTCTCGTGA TTTACGCGCA GGCGATACTT TCTCAATACT GATGAACGAT
CAATTTGTCC AAGGTGAAGC CACGGGCAGT AGCCGTTTAG AAGGCATAGA AATTGTTAAT
GGTCGTCGCA ATATTACCGC TTTTCAGCAT ATCGATGGCA ACTATTATGA TGAAGAAGGT
TCTGGCTTAG CCAAGGCATT CCAACGAATT CCACTGAATA AAAAAGTACG CCTAACATCA
CGTTTCAACC CTAAGCGTAA AAATCCTGTG ACCGGCAGAG TTTCACCTCA CAATGGTACC
GACTTTGCTA CCCCCATTGG CACTAGCGTC GTGGCGCCAG GGGATGGCGT GGTAACCTTA
GTCACTAAGC ACAGGTATGC GGGCAACTAC ATAGTGATAG AGCATGACAA CAAGGTGCGT
ACTCGTTATT TGCATCTATC AAAGTTCTTA GTAAGAAAAG GCCAGCGAGT CACTCGTGGT
CAAGTGATTG CATTGTCTGG CAATACAGGA CGTTCAACCG GCCCACACCT TCATTATGAA
TTTCATGTCA ATGGCCGCCC GGTCGATGTA ATGAAAGTGG ATATACCAGA AGCATCGACC
TTACCGAACA AGTCTTTAGA GCAATTTAGA GCCTTGGTTA AGAGCCGCAA GATGATGATG
CAGCTGGGAT AG
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| Protein sequence | MALNLPRASL QNLPNFHKKV LMASVFFMGA ALLWPSEQSF SPERIPVALD IESLLPDLST
GPVTKVAAKR QPLFEHVIET GDTLSKLFEQ AGIDQKTMYK VLEADYSVLA FDTLLPGNRI
QFWQDKNGDL TKLELYFNPA HQVVFTRFDD GSFNAEEVIR EGVWQNRVVG GEINGSFYVS
AKRAGLSATD IQKVESLLKN KLNFSRDLRA GDTFSILMND QFVQGEATGS SRLEGIEIVN
GRRNITAFQH IDGNYYDEEG SGLAKAFQRI PLNKKVRLTS RFNPKRKNPV TGRVSPHNGT
DFATPIGTSV VAPGDGVVTL VTKHRYAGNY IVIEHDNKVR TRYLHLSKFL VRKGQRVTRG
QVIALSGNTG RSTGPHLHYE FHVNGRPVDV MKVDIPEAST LPNKSLEQFR ALVKSRKMMM
QLG
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