| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2498 |
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| Symbol | cysS |
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| ID | 4019001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2979361 |
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| End bp | 2980740 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956529 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_563501 |
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| Protein GI | 91793850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000158827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAAGA TTTACAATAG CATGAGCCGC GAGAAACAAG AGTTTAAACC TATTACCCCT
GGTAAAATTG GCATGTATGT TTGTGGCATA ACTATTTACG ATTTATGCCA TATTGGCCAT
GGTCGTACTT TTGTATCTTT TGACATGATC GTACGTTATC TACGTTACCT AGGTTACGAA
GTAAATTTTC AGCGTAATAT TACCGATGTG GATGACAAGA TCATCAAACG CGCCGCTGAA
AATAATGAAT CTTGTGATGC GTTGACTGAG CGTTTAACCG CTGAAATGCA TAAAGATTTT
GATGCGCTTA ACATGGTCAG GCCTGATTTT GAGCCGAAAG CGACCTTGCA TATGCCTGAA
ATCATTGAGA TGGTGCAGCG GTTACTAGAC CGTGGCCATG CTTATGTTGC TCCCGATGGT
GACGTGTTAT TCAGTGTGGC GTCCTATAAA GAGTATGGGC GTTTATCTGG GCAGAATATT
GACCAACTTC AAGCGGGTGC ACGCGTTGAA ATTGATCATA ACAAACAAAA CCCGATGGAT
TTTGTGCTGT GGAAAATGTC AAAGCCTGGC GAGCCAACCT GGGAGTCACC TTGGGGAGCG
GGTCGTCCAG GATGGCACAT TGAATGTTCA GCGATGAACG GTAAGCACTT AGGTACCCAT
TTTGACATTC ATGGCGGCGG CTCAGACTTA CAGTTTCCCC ATCATGAGAA TGAAATCGCT
CAATCTTGCT GTGCCCATGA CACCCCTTAT GTGAACTATT GGATGCACAC AGGCATGGTG
ATGGTTGACC GTGAAAAAAT GTCTAAGTCG TTAGGTAACT TTTTCACCAT TAGGGACGTA
CTTAAGCATT ATGATGCGCA AACCGTGCGT TACTTCTTGC TATCTGGACA TTATCGCAGC
CAGCTTAACT ACTCTGAAGA CAACCTTAAG CAGGCGCGTT CAGCACTAGA GCGTTTATAC
ACAGCGTTCA AAGATTTGGA TTTAACTGTA ACCGCAGCGC CTGCCGATGA GTATGTGACT
AAGTTCAAAT CTGCCATGAA TGATGACTTT AATACCCCAG AAGCCTATTC AGTGTTGTTT
GATATGGTGC GTGAAATTAA CCGCTTAAAA ACCACGGACA TGGGTGCCGC ATCGGCCCTT
GGGGTGAGCA TGAAGCAGCT TGCTGATGTA CTTGGGATTG TCAGTGTAGA TATTGAGACC
TTCTTTAAAG GCAGTGGCAG CGATGATGAA GTGGCTGAGA TTGAAGCGCT GATTGTCGAG
CGTAACCGTG CCCGTACTGA AAAGGACTGG GCTGCGGCCG ATGTGGCGCG CGATCGTCTA
AATCAGCTAG GTGTGGTGCT TGAAGACGGT GAAAATGGGA CTACTTGGAA AAAGAAGTAG
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| Protein sequence | MLKIYNSMSR EKQEFKPITP GKIGMYVCGI TIYDLCHIGH GRTFVSFDMI VRYLRYLGYE
VNFQRNITDV DDKIIKRAAE NNESCDALTE RLTAEMHKDF DALNMVRPDF EPKATLHMPE
IIEMVQRLLD RGHAYVAPDG DVLFSVASYK EYGRLSGQNI DQLQAGARVE IDHNKQNPMD
FVLWKMSKPG EPTWESPWGA GRPGWHIECS AMNGKHLGTH FDIHGGGSDL QFPHHENEIA
QSCCAHDTPY VNYWMHTGMV MVDREKMSKS LGNFFTIRDV LKHYDAQTVR YFLLSGHYRS
QLNYSEDNLK QARSALERLY TAFKDLDLTV TAAPADEYVT KFKSAMNDDF NTPEAYSVLF
DMVREINRLK TTDMGAASAL GVSMKQLADV LGIVSVDIET FFKGSGSDDE VAEIEALIVE
RNRARTEKDW AAADVARDRL NQLGVVLEDG ENGTTWKKK
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