| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2495 |
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| Symbol | clpP |
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| ID | 4018995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2975144 |
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| End bp | 2975755 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956523 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_563498 |
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| Protein GI | 91793847 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000198217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAAAG CGCCAGAATC TGTACTCAAT GCTCTTGTAC CTATGGTTGT TGAACAAACC
GCTAAGGGTG AACGTTCATA TGATATTTAT TCTCGCCTGT TAAAAGAACG GGTGATATTT
TTAGTTGGCC AAGTTGAAGA GCACATGGCT AACCTTATCG TGGCCCAGTT ACTGTTCCTC
GAATCAGAAA GCCCAGATAA AGATATCTAT CTATACATTA ACTCGCCAGG TGGCTCTGTC
ACTGCGGGTA TGGCCATTTA TGACACCATG CAATTTATCA AGCCTAACGT CAGTACTGTG
TGTATTGGAC AAGCGGCAAG CATGGGCGCA TTTTTGTTAG CTGGCGGTGC TAAGGGCAAG
CGTCATTGTT TGCCTAACTC ACGAGTGATG ATCCATCAGC CATTAGGTGG CTTCCAAGGT
CAGGCATCGG ATATCGCCAT TCATGCTCAA GAAATCCTGG GTATCAAGAA CAAATTAAAC
CAAATGTTGG CCGAGCATAC GGGTCAACCG CTGGAAGTTA TCGAGCGTGA TACTGACAGA
GACAACTTCA TGAGTGCAAC GCAAGCAATG GATTACGGTT TAGTTGATTC GCTTTTAACT
AGTCGTAGCT GA
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| Protein sequence | MHKAPESVLN ALVPMVVEQT AKGERSYDIY SRLLKERVIF LVGQVEEHMA NLIVAQLLFL
ESESPDKDIY LYINSPGGSV TAGMAIYDTM QFIKPNVSTV CIGQAASMGA FLLAGGAKGK
RHCLPNSRVM IHQPLGGFQG QASDIAIHAQ EILGIKNKLN QMLAEHTGQP LEVIERDTDR
DNFMSATQAM DYGLVDSLLT SRS
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