Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2493 |
Symbol | |
ID | 4018993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2971278 |
End bp | 2973629 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956521 |
Product | ATP-dependent protease La |
Protein accession | YP_563496 |
Protein GI | 91793845 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000146156 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG AGCGTGAAGC GCATATCGAA CTCCCCGTGC TGCCACTGCG AGATGTGGTG GTCTATCCCC ATATGGTTAT TCCGTTGTTT GTCGGCCGAG AAAAATCTAT TCGTTGCCTT GAATCGGCCA TGGAGCAAGA CAAGCAAATT TTATTGGTCG CCCAGCGCGA TGCCGATTTA GACGAACCAG GTAAAGACGA CATCTTCGAC ATAGGCACAG TGGCCTCTAT CTTGCAGTTG CTTAAACTGC CCGATGGCAC AGTGAAAGTC TTGGTTGAAG GCGGTCAGAG AGCCAAAGTC TTAAAGTACA CCCAAGAAGA CAGTTTCTTC GTTGCCACTG CCCAGTATTT AGAATCAGAA GATCTTATCG AGAAAGAAGA AGAGGTCTTA GTTCGCAGTG CAATAAGTCA GTTTGAGGGT TACATCAAGC TGAACAAAAA AATCCCTCCG GAAGTATTAA CCTCGCTTTC AGGAATAGAT GAAGCTGCAC GCCTTGCCGA TACCATGGCG GCCCATATGC CGCTTAAGCT TGAAGACAAG CAAGCCGTAC TTGAAATGAT CAATGTCGGT GAACGTCTTG AATACTTGAT GGCGATGATG GAAGCGGAAA TTGACCTATT ACAGGTTGAA AAACGCATTC GTACTCGGGT CAAAAAGCAA ATGGAGAAGA GTCAGCGTGA GTACTATTTG AATGAGCAAA TGAAAGCCAT TCAAAAAGAA CTGGGCGACA TAGATGAAAG TCATGATGAA TTTGATGTTT TAGGCAAAAA AATTGAAGAA GCTGGCATGC CAGCAGATGC CAAAGACAAG GCCAATGCCG AACTCAATAA ACTTAAGATG ATGTCGCCAA TGTCGGCAGA AGCCACAGTG GTGCGCAGTT ATGTTGACTG GATGACGTCA GTGCCTTGGA AAAAGCGCTC TAAAATTAAG CGCGATTTAG CCAAGGCCCA AGTGGTGCTG GATACCGACC ACCACGGTCT TGAAAAAGTA AAAGACCGGA TTTTAGAGTA CTTGGCGGTG CAGAGCCGGG TGCGTAAACT CAAAGGGCCA ATCTTGTGTT TAGTCGGACC ACCGGGTGTG GGTAAAACCT CATTAGGTCA GTCTATTGCC AAAGCGACCG GCCGTGAATA TGTGCGGGTT GCGCTAGGCG GCGTGCGTGA TGAGGCTGAA ATTCGTGGCC ATAGACGGAC TTATATTGGC TCTATGCCTG GTAAAATCAT CCAGAAGATG GCCAAGGTTG GGGTGAAAAA CCCACTGTTT TTGCTCGATG AAATCGATAA GATGAGCTCA GACATGCGCG GCGATCCGGC ATCGGCACTG CTTGAGGTGT TAGATCCTGA GCAAAATGGC ACCTTTAACG ATCATTACCT CGAAGTCGAT TATGACTTAT CGGATGTAAT GTTTGTGGCT ACCTCAAACT CTATGGATAT TCCAGGGCCC TTATTGGACC GCATGGAAGT CATTCGTCTT TCTGGTTATA CCGAAGATGA AAAATTAAAT ATTGCCAAAA AGCACTTACT TGAGAAACAA ATTGAGCGTA ACGGCTTGAA AGCCAAGGAA GTGCATATCG ATGATAGCGC GATTTTGGGT ATTATTCGTT ATTACACTCG TGAAGCCGGT GTGCGTTCTC TTGAACGTGA GCTTTCAAAA ATTTGCCGCA AAGTCGTTAA ACAGATTTTA TTGGATAAAA GCGTTAAATC TGTGGTCATT AATCAAGACA ACCTGAAAAC CTTCTTAGGG GTGCAGCGTT TTGATTACGG CAAAGCCGAG TCTAAGAACC AGATAGGTCA AGTGACAGCT CTCGCCTGGA CCCAAGTGGG CGGGGATTTA CTCACTATAG AAGCGACGTC AGTGGCGGGT AAAGGTAAGC TGGCTTATAC CGGTTCCTTA GGCGATGTGA TGCAAGAGTC TATTCAAGCG GCCATGACGG TGGTGCGTGC TCGTGCAGAA CAATTGGGTA TCAATAACGA TTTCTATGAA AAACGTGATA TCCATGTGCA TGTACCTGAA GGGGCGACGC CAAAAGACGG GCCTTCAGCG GGCGCGGCTA TGTGTACCGC TTTAGTGTCT AGCCTTACTG GGAATCCAGT GCGCAGCGAT GTTGCCATGA CAGGGGAAAT CACCCTACGT GGTGAGGTGT TGCCCATTGG CGGCCTAAAA GAAAAATTGC TTGCAGCCCA TCGTGGCGGC ATTAAGCATG TGCTAATTCC TAAGGAAAAT GAGCGTGACT TGGAAGAAAT TCCAGCTAAT GTTATCGCTG ATTTGCAAAT TCATCCGGTT CGCTGGATTG ATGAAGTGCT TAAATTAGCA CTAGAAAAGC CGGTTGAAGG CTTTGAAGTG GTTAAAAAGT AG
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Protein sequence | MTEEREAHIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ESAMEQDKQI LLVAQRDADL DEPGKDDIFD IGTVASILQL LKLPDGTVKV LVEGGQRAKV LKYTQEDSFF VATAQYLESE DLIEKEEEVL VRSAISQFEG YIKLNKKIPP EVLTSLSGID EAARLADTMA AHMPLKLEDK QAVLEMINVG ERLEYLMAMM EAEIDLLQVE KRIRTRVKKQ MEKSQREYYL NEQMKAIQKE LGDIDESHDE FDVLGKKIEE AGMPADAKDK ANAELNKLKM MSPMSAEATV VRSYVDWMTS VPWKKRSKIK RDLAKAQVVL DTDHHGLEKV KDRILEYLAV QSRVRKLKGP ILCLVGPPGV GKTSLGQSIA KATGREYVRV ALGGVRDEAE IRGHRRTYIG SMPGKIIQKM AKVGVKNPLF LLDEIDKMSS DMRGDPASAL LEVLDPEQNG TFNDHYLEVD YDLSDVMFVA TSNSMDIPGP LLDRMEVIRL SGYTEDEKLN IAKKHLLEKQ IERNGLKAKE VHIDDSAILG IIRYYTREAG VRSLERELSK ICRKVVKQIL LDKSVKSVVI NQDNLKTFLG VQRFDYGKAE SKNQIGQVTA LAWTQVGGDL LTIEATSVAG KGKLAYTGSL GDVMQESIQA AMTVVRARAE QLGINNDFYE KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRSD VAMTGEITLR GEVLPIGGLK EKLLAAHRGG IKHVLIPKEN ERDLEEIPAN VIADLQIHPV RWIDEVLKLA LEKPVEGFEV VKK
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