| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2485 |
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| Symbol | |
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| ID | 4018985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2962584 |
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| End bp | 2963594 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956513 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein |
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| Protein accession | YP_563488 |
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| Protein GI | 91793837 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.44622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATTAC TCGACATACG CAACCTCACC ATAGAACTCA ACACCAATAA CACGAAAGTG
AAGGTGCTAG AGAAAGTGAG CTTGACCCTG AATGCCGGCG AAATTCATGG CCTAGTGGGG
GAGTCTGGCT CAGGGCGCAG TTTGCTCGCC AAAGCCATCT TAGGCGCCCT TGGTCCCCAG
TGGACAGTGA TAGCCGACAG ATTAATGTTA GATGGAAAAA ACTTACTCGA CATGAGCCCC
AAACAGCGTC GCTGCTTGAT GGGCAGTGAT ATTGCGATGA TTTTCCAAGA CCCTTCTGGC
AGTTTAGATC CGGTGAAAAC CATTGGCAGT CAGCTGATTG AATCCATGAC GCCTAATAAA
GCCGTGGCTT TTTGGCGCCG AGGCAAAGAC ACTTACCTTA ACGCACTTAA ATGGCTGCAT
AAGGTGGGCA TTAAGAATCC AAAATCTTTG ATGTCCTGCT ATCCGTGGGA GCTGTCCGAA
GGAGAGTGTC AGAAAGTCAT GATTGCCATG GCGATCGCCA ATCGACCTAA ATTATTGATC
GCCGATGAAC CGACCAACTC GGTTGAGCTT AATGCTCAGG CACAAATTTT CAGATTATTA
TCCCAGCTCA ATCAACTGCA AAATGTGTCA ATTTTGCTCA TCAGCCATGA GCTGGAAACC
TTAGTGCAAT GGTGCGATCA CTTAACTGTG CTCTATGGCG GTCAGGTCAT GGAGTCAGGA
CCCACAGATG AGATGATAGC CCATCCGTTT CATCCTTATA CTAAAGCGCT CCTGAAAAAC
CTGCCCGATT ACACAGGTAA AATGCGACAT AAATCCTATT TACCGACACT GCAGGGCTCA
TCGCCTTCCT TGCACAATAT GCCAGCGGGC TGCCGCTTAG GGCCACGATG CCCTGAGGCT
CAGCGAAATT GCGTTAAGCA ACCCGCTCTT GAGCATCAAA AAGACCGCTA CTTTGCGTGT
CATTTCCCCT ATCTAAATGA GCAGGATACC GATGACGACG CCATTGCTTA A
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| Protein sequence | MPLLDIRNLT IELNTNNTKV KVLEKVSLTL NAGEIHGLVG ESGSGRSLLA KAILGALGPQ
WTVIADRLML DGKNLLDMSP KQRRCLMGSD IAMIFQDPSG SLDPVKTIGS QLIESMTPNK
AVAFWRRGKD TYLNALKWLH KVGIKNPKSL MSCYPWELSE GECQKVMIAM AIANRPKLLI
ADEPTNSVEL NAQAQIFRLL SQLNQLQNVS ILLISHELET LVQWCDHLTV LYGGQVMESG
PTDEMIAHPF HPYTKALLKN LPDYTGKMRH KSYLPTLQGS SPSLHNMPAG CRLGPRCPEA
QRNCVKQPAL EHQKDRYFAC HFPYLNEQDT DDDAIA
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