Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2472 |
Symbol | |
ID | 4018972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2948811 |
End bp | 2951330 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956500 |
Product | hypothetical protein |
Protein accession | YP_563475 |
Protein GI | 91793824 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00113127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAC TCATTTTGGG TGTTGCAATT GCATCTGCTC TTGGACTCAC AGGCTGTGGC GAAGATAGCA CAAACGAATT AATTGAAAAG GCAGTGCCGT TAATCCCAGT TTCGTACATT GATTTCGATC CGGGCAACAC TGACCCGGCG AAACGAATAT TACCATTACC TAATGATCTG CTCTTCAGCG GCACCAGTGA TGGCACCATC AATATGCCAA ATAATGTAGA AGCGGGTGGC GACTATGTTA ATCCTAAGAT TGCGTTGGGT GCTCTGGATG GCTGGTCTAC CACATCACCT ATCTCTATTG ATATTAAATT AGCTAAAGAT CATGATGGTA CAGAGCTAAC ACTGGATGAA GCTTCCGTGG CCCAAGCGGG TGCGGTACGT TTATTTGAAG CCACAGTGGG TGGTGTGTTG TCTGGCGATC CTGAATGTAA AGCAGCAACG TCAGTGTCTG CCTGTAAAGT GGGTGCAGAG CTTGAATACG GGGTTGATTT TATTTCTGTG GGTTCAGGCA GCAAAATCGC TATTATTCCA CTTAAGCCAT TAAAGGCTAA ACAATCCTAT ATTTACGCCA CCACTAAGCT TATTCAAGAT TCTAAGAATC GCGCCATCGA AGCGTCAGCC ACTTACAACT TGTTGAAGCT GGATATGGAA ACCAATTTCT TAGCAACACC CAGTCAACGT TTACTGCAAA CTTTAGTGAA CAGTTATGAA AAGGGCATGG CCGCCGAGCA TGGTGTTGAT GCCAGTGAAA TTACTTACTC AGGGCTGTTT ACGACGCAAT CGGTTGCCGA TGTGTATGAG ACAACTAAGT TATTAATGGC GTCCAGCGCG CCTTATAAGC CTTCTTTCGT GCAGACGCCG ACCCCTATGG GGATAACCGT TGCCCAAGCG CGTGGGATGA CGCCCTCCAC TGACAGAAGC TATGTGATGG CTAATATGGC GGACTTGTAT ACCGCCACCA TTCGTGTGCC TATCTATGGT AATTGCTCTT CAGCATCCTG TGTGCTAGAT AATAATTCAG TTGAAGAAAA ACGAAAGCGC TTAAATAATA GCCGCTGGTC AGCTCAAGGT GATAGCCCGC TTTCAGTGTT ATTGGCAGTG CAAACAGGAA CCATGAGCAC GGCACATTTT GCTACTCAAG CCATAGCCCA AGGTGTCGAC CCGGCTGCGG CGCAAACTAA CCCAGCCCTA CTTGTCGGTA AAACGTTCAC CTTAAATGAC GGTACTGCTG CGGATAAGAC CAAGCATTTA ACCAAATTTA ACCCTATACC TGCAATCAAG GGTTATGAAA ATATTAAGCT GCAAATTACC CTGCCAAACG GCCCTAAATT AGCGGCCTTT TTAGCGGGAG AAGGTAAAAC CTTCGTGCCG CCCACCAATG GTTGGCCTAC AACCATGGCT TTACATGGTC TAGGCGGCGG CAAAGAAATG GCATTGTCTT ATGCCGGAAC GTATGCGGCA GCGGGTATTG CCACTATCGC TATGGATATG CCACTGCACG GTGAGCGTTC GTTTGACGCT AATAGTGATG GTATCTATGA AGTTACTGCA ACGCTAGAGG ATTACGGCAA AGTTGTCGGT AAACCTGATG CCTTTAACAA AGGCACTATC TTAGATTTTA TCAATATTGC TAGCTCATTG ATGGTGCGTG ATAACTTCCG TCAGGCAACC CTTGATCACT TAAGCTTGCG GCTATTACTT ACCGGGATGG CACAACAACT TGCAGCCGCG AGTCAGCCAC AAGTGTTTGA TGTGTCTAAA ATCAGTGTTC AAGGCTTAAG TCTTGGCGGC ATAGTCGGTT CAACCTTATC AACTTACGCC AGTACGGGGC TTAAAGATCC TACAACAGGT GCTGATTTAG GCAATCCATT TGCGGTAAAT GCCGCGTCTT TAGTGGCGCC AACTGGCGGC TTAGCGGGTT CATTTGCAGG TTCAGCAAGC TTTGCGCCAG TGTTATTTAC TAACGTGACT AAGGATCCGA CCTTTATTGC ACTAGTGGCT GAGAAAAACA TAGAAGGTTA TCTCGAAGGT ACACCTGAGT ATACAGCCCT TGTGCAAGCC GTGTACGCAG GCTTTATCCC AGGCTTTGCC TTAGCGATTC AAACAGCAGT CGACTCAGTT GACCCAGTTA ACCATGGCGC TAAGTTAGCG GCATTAGGTT TACCGGTTCA TTTGATTGAA GTGGTCGGTG ATGGCGCGGA CAATAAGCCT GATCAAACCC TACCTAATTC AGTTGCAGGT TTCCCGCTAT CAGGCACTGA GCCTTTTATC CGCTCATTAG ATCTAGGCTG TGTTGCTTCA ACAACTCAGG GTTCAGGTGC GGTGCGTTTC GCTAAAGGGC ATCACAGCTC AATAGTGGAC CCCAAAGAAA GCTCTGCCAC AGATGGCATG GCGTTTGAGG CTACCAAAGA AATGCAGAAG CAGGTAGCAG GTTTTGCTCA GTCAGCAGGC ATGGGAGCAC CAACCATAGT TGTGACAGAT ACTAAGGTTA TTGCTGCCTG TGGTCGCTAA
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Protein sequence | MKRLILGVAI ASALGLTGCG EDSTNELIEK AVPLIPVSYI DFDPGNTDPA KRILPLPNDL LFSGTSDGTI NMPNNVEAGG DYVNPKIALG ALDGWSTTSP ISIDIKLAKD HDGTELTLDE ASVAQAGAVR LFEATVGGVL SGDPECKAAT SVSACKVGAE LEYGVDFISV GSGSKIAIIP LKPLKAKQSY IYATTKLIQD SKNRAIEASA TYNLLKLDME TNFLATPSQR LLQTLVNSYE KGMAAEHGVD ASEITYSGLF TTQSVADVYE TTKLLMASSA PYKPSFVQTP TPMGITVAQA RGMTPSTDRS YVMANMADLY TATIRVPIYG NCSSASCVLD NNSVEEKRKR LNNSRWSAQG DSPLSVLLAV QTGTMSTAHF ATQAIAQGVD PAAAQTNPAL LVGKTFTLND GTAADKTKHL TKFNPIPAIK GYENIKLQIT LPNGPKLAAF LAGEGKTFVP PTNGWPTTMA LHGLGGGKEM ALSYAGTYAA AGIATIAMDM PLHGERSFDA NSDGIYEVTA TLEDYGKVVG KPDAFNKGTI LDFINIASSL MVRDNFRQAT LDHLSLRLLL TGMAQQLAAA SQPQVFDVSK ISVQGLSLGG IVGSTLSTYA STGLKDPTTG ADLGNPFAVN AASLVAPTGG LAGSFAGSAS FAPVLFTNVT KDPTFIALVA EKNIEGYLEG TPEYTALVQA VYAGFIPGFA LAIQTAVDSV DPVNHGAKLA ALGLPVHLIE VVGDGADNKP DQTLPNSVAG FPLSGTEPFI RSLDLGCVAS TTQGSGAVRF AKGHHSSIVD PKESSATDGM AFEATKEMQK QVAGFAQSAG MGAPTIVVTD TKVIAACGR
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