Gene Sden_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2410 
Symbol 
ID4018908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2868611 
End bp2870791 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content48% 
IMG OID637956437 
Productphosphate acetyltransferase 
Protein accessionYP_563413 
Protein GI91793762 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000273305 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTA ATATTATGCT GATCCCAACA GGCACAGGAG TGGGTTTAAC CTCCTTAAGC 
TTAGGTATGG TTCGCGCCTT GGAACGTAAA GGGGTTAAGG TACAGTTCTT TAAGCCCATA
GCCCAAATAC GCACTGGCGA TAAAGGTCCC GAACGCTCAA CCACCATTTT GAGCCAATCC
CCCTCGGTGA ATCCCCTTGA ACCTTTCTCC ATGCATCATG CTGAAAATTT AATTCGCGCC
GAGCAAACCG ATGTATTGAT GGAGCAAATT ATTGCAAGGG CCGCAGAGTG TGCCAGTAAC
ACGGAAATCA TAGTCATTGA AGGGCTAGTG CCGACGCGCT CACACCCTTT TTCTGATGAT
ATTAACTATG AAATTGCCAA AGCCCTGGAT GCCGATGTGG TGTTTATCGC AACCCCAGGC
AATGATACGG CCAACGGCCT AATGAATCGC TTGGAGATTG CCTATAACTC ATGGGGGGGT
AATAAGAATA AGCGCTTAAT TGGCGCCATC ATCAACAAGA TAGGGGCGCC AGTAGATGAA
GAAGGCCGTG CCAGACCCGA TTTATCAGAA GTCTTTGATC ATCAAGGAGT GAAGCATTCC
GATACAGCCG GTATGTTTCA GCTACCAGGT AAGAGCCCAC TGCGTATTTT AGGTAGCGTG
CCATACAACC TAGATCTGGT GTCGCCACGG GCCTCAGATC TGGCTAAGCA TTTAAATGCC
CGCATCATCA ATGCCGGTGA AATGGACACA CGCCGTATGC GTAAAGTCAC CTTCTGTGCC
CGAAGTATCC CCAATATGGT GACTCACATT AAAACCAACT CCTTACTGGT GACCTCTGGG
GATCGCTCCG ATGTGATAGT GTCTGCCTGC CTTGCAGCTA TGAATGGTGT CAAAGTCGGT
GCTTTATTGC TCACTGGAGG CTATCAGCCC GAGCCCGAAA TCATGAAGTT ATGCGAGCAA
GCCTTTGAAA CTGGCCTGCC AGTGTTTCTT ATCGATACCA ACACTTGGCA AACTTCATTA
AACATTCAGC GTTTTGATCA TGAAGTCCCA GTGGATGACG CCGTTCGCAT CGAGAAAGTG
CAGGAGTTTG TCGCCAGCCA CATAGATCAA AATTGGATAG AAAGTGTCAC CCAAGATTCG
CCTCGTGAGC ACAGACTGTC ACCGCCAGCC TTCCGCTACA AGCTGACAGA ACTTGCCAGA
GCCGCGAAAA AGACCATAGT ACTGCCTGAA GGTGAAGAAC CTAGAACCAT CAAGGCCGCC
TCTATTTGCG CCGAACGCGG CATTGCCAAA TGTGTGCTCT TGGGTAACAA AGAAGAAATT
GAGCGTTTAG CCTCATTGCA GGATTTAATC TTAGGTGATG GGATAGAGAT AATCGATCCC
ATAAACGTTC GAGATAACTA CGTGGCACCT ATGCTGCAAC TGCGTAAAGG CAAAGGGCTA
ACTGAGGTGG TCGCCAAGGA GCAATTAGAA GACAATATGG TGCTCGGCAC CATGATGCTA
GCGCAAGATG AAGTTGACGG TATCGTCTCT GGCGCCATCA ATACCACTGC AAACACTATT
CGCCCACCAC TGCAGTTAAT TAAAACGGCG CCAGGTTCGA GCTTAGTGTC TTCCATCTTC
TTTATGTTGA TGCCAGATCA AGTTTTGGTT TACGGTGATT GTGCCATTAA TCCCGATCCC
AATGCCGAGC AACTTGCCGA TATCGCCATA CAATCGGCAG AATCCGCCAA AGCCTTCGGT
ATTGAGCCTA GAGTTGCCAT GATAAGTTAT TCAACGGGTA ATTCAGGCAC AGGCTCAGAT
GTGGATAAAG TCCGTGAAGC CACCCGGATT GCAAAAGAGA AACGCCCAGA TTTAATTATC
GATGGCCCAC TGCAATATGA TGCCGCCGTG ATGCCAAATG TGGCGCGGTC TAAAGCACCA
GACAGCCCCG TAGCAGGTAA AGCCACGGTA TTTGTATTCC CAGACTTGAA TACAGGCAAT
ACCACCTATA AAGCGGTGCA ACGTAGTGCA GATTTAATTA GCATAGGCCC TATGCTTCAG
GGCATGCGAA AACCTGTGAA TGACTTATCA CGGGGCGCAT TAGTGGATGA CATTGTCTAC
ACTATCGCCT TAACAGCCAT TCAAGCGGCG CAAAATGAAG CTAAATTAGT CTTGGACGTC
AAGCCATTAT CTAAAAATTA A
 
Protein sequence
MSRNIMLIPT GTGVGLTSLS LGMVRALERK GVKVQFFKPI AQIRTGDKGP ERSTTILSQS 
PSVNPLEPFS MHHAENLIRA EQTDVLMEQI IARAAECASN TEIIVIEGLV PTRSHPFSDD
INYEIAKALD ADVVFIATPG NDTANGLMNR LEIAYNSWGG NKNKRLIGAI INKIGAPVDE
EGRARPDLSE VFDHQGVKHS DTAGMFQLPG KSPLRILGSV PYNLDLVSPR ASDLAKHLNA
RIINAGEMDT RRMRKVTFCA RSIPNMVTHI KTNSLLVTSG DRSDVIVSAC LAAMNGVKVG
ALLLTGGYQP EPEIMKLCEQ AFETGLPVFL IDTNTWQTSL NIQRFDHEVP VDDAVRIEKV
QEFVASHIDQ NWIESVTQDS PREHRLSPPA FRYKLTELAR AAKKTIVLPE GEEPRTIKAA
SICAERGIAK CVLLGNKEEI ERLASLQDLI LGDGIEIIDP INVRDNYVAP MLQLRKGKGL
TEVVAKEQLE DNMVLGTMML AQDEVDGIVS GAINTTANTI RPPLQLIKTA PGSSLVSSIF
FMLMPDQVLV YGDCAINPDP NAEQLADIAI QSAESAKAFG IEPRVAMISY STGNSGTGSD
VDKVREATRI AKEKRPDLII DGPLQYDAAV MPNVARSKAP DSPVAGKATV FVFPDLNTGN
TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAA QNEAKLVLDV
KPLSKN