| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2404 |
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| Symbol | |
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| ID | 4018902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2858561 |
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| End bp | 2861179 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956431 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_563407 |
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| Protein GI | 91793756 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTA ATTCAATATT AGCCAAAGCG GTTCGCTTTG CGCTAATTGG TGGTGCTGCA
ACTGCGGCAT TATCAGCCTC TGTCGCCACA GCTGCCGATG ACCAAGCTAA AGTAGAACGT
ATCGAAGTGA CAGGTTCACG TATCAAGCGT ACCGATATGG AAGGTTCATC TCCAGTCACC
ACTATCGATG CATCGGCTAT CGAAAAAACC GGTGAGCTCA GCATGGCGGA CGTACTGCGT
CGCAGCAACC TAAACACCTT CGGTTCGACC TCTGAAAACT CTGGCAGTGC CCAGCAGTCA
CAAGCAACAA TTAACTTACG TGGCGCAGGT TCTGATCGTA CTTTAGTCTT ATTAAACGGT
AAGCGTATGC CAGGTTCACC GACACTTGGT GGTACCGCGG TTAACTTAAA CACTATCCCT
ACTGCTGCTA TCGAGCGCAT CGAAGTACTT ACCGATGGTG CATCTGCCGT TTATGGCTCT
GATGCGGTAG CAGGTGTGGT TAACATCATC ACTAAGAAAA ACTTTGATGG TGTTGAAGTG
TCTACTACTG CGACCGACCC GGTGCAAGGT GGTGGTGAAG AGTGGAAGAC TCACATCGTT
GGCGGTTTGA CTGGTGATAA AGGCAGCATG ACCTTCTCGT TCGAGCATTT AAACCGTGAA
ATCATTTACC AGCGCGATCG TTGGTTCACG AGTTCATCTA ATGTTTTAGC GCCTAAGTTT
GATGATGCTA CTGGTGTTTC AAAATATGCC CGTAATTTCT TAGACGGAAA AACGGGCCAA
TTTAGCCCTA TGGCGGCTTG TAATAACCCT AAGATGGTTG GCGCTGGTCA TGTGTATGAT
GCTGGGGGTG GAGACCGTGT ATGTGGCTAT GACTACACTT CAGAAGCCGC CGATCATGCT
TCTCGCACCT ATACAGCGGG CTACGTAAAC TCTGAATATG AATTGTCAGA TGAAGTGGTA
TTCCAAGGTC AAGGCCTATT CTCACGTAAT GAGACCTTTG GTCGCTACGC GCCGGCAGCA
GGCTGGTTTA ATGTGGCAGC AAATCAACTA GACATTCAAA ACTTTGATGC TGCAGGTAAC
TTAACCGGCG TCTCTAAAAA CCCAAATGCG GGCAAGGCAT ACTACCGTTT CACCGATGTC
GGCACTCGTG ACGGAAACAC GACTGATTAC AGCACTGATA TTCAGCTAGC ACTCGTCGGT
TCTCACGATG ATTTTGGCTG GGATGTGACC TATCACTACA ACCTTGCTGA AAACACTAAC
TCAGGTACTG GTTATGTGCA CCGTCCAACG GTTGAACAAT ATGTAAAGGA CGGTATATTC
AACTTTGGAC CAGAGGGTAA CTCACAATCA GTTATTGCAG ACATAGCTCA CAACACACTT
AAACAAGATA TTATGAAGTT CCAGAGTATC AACGCAGGCT TAAACTTCGA ATATTTAGAG
CTTCCAGCTG GTGCTGTATC TTGGTACTTA GGCACCGAAG CTTCACAGTA TAAGTATGAC
GCCAAGGTTG ACGCGCAAAC TGCAGCCGGT GACGTTATTG GCTCCTCTGG CAATGGCTCA
CAAGGCGATC GCGATGTGTA TGCGGTATTT GCTGAATCTA TCGTGCCAGT AAGCGAAGAT
GTAGAACTTA ACTTTGCTTA CCGTTATGAC AAATACTCTG ACTTCGGTTC TGCTACTACG
CCAAAGGTAG CCATCAGATA TCAAGCTCTT GAAGATGTTG TTGTTCGTGC CTCTTGGGGA
CAAGGCTTTC GCGCTCCATC ACTGTCTGAC TTGCTAGCAG CCGATGCTCT GAGTGCTGAT
ATGGCAACTG ATTACTCATA CTGTGATGTG TTGGGTACTG CAGTTGCTGA CTGTAAAGCA
AAGCAGTATG ACGTTACACG CCAAGCTAAC TCAGAGTTAG AGCCTGAAAC ATCAGATTTT
TATAACTTAG GTGTTATTTG GGATATCACA GATAACCTAA GCACTAAGGT TGAGTATTAC
AACCTAAGTA TCGATAACGT CATCACCTTC GTGTCTTTAG ACTCTTTATT AAAAGAAGAG
CAAAAAGTCG GTTACGGCAA CTTAAGCCGT GGTGAAATTA AACGTGTTAA TAATAACCCT
AACGGCAAAC TATTATCGGC TACTACACCT AAGGCCAATG GCACAGGTTT CGATACGACA
GGTATAGATT TCAACATCAC CTACAGTGGA TTTGAAACTG CAATTGGTGA GTTTGGCACC
AGCTATGACT TAACGTATGT GCTGTCATAT GACGATGAAG AATATTTTGA CGGTCCTGTA
AACGACAAGA TTGGTCGTAA CGGCAAGCCA GAAATACGCT TTACTTGGGT GTTAGACTGG
AGCTATGGCG ATCACTCAGC GTCATTGTTA ACTCAGTATA TTGACGGCCA AAGTGAAAAA
ACGAACCCAA CTGACTTCTC ACAAGTTGGC AATTTATCGT CACAAACGAC CTTCGATGTT
AGCTATGGCT ACCATACATC TTGGGATGGT AAATTTGGCT TAGGTATTCG TAACTTAACT
AATCAAGATC CTGTGCTTGA TTCTGACTTA GAATATGATT CATCACTGTA TAACCTTTAT
GGCCGTACAT TTACCGCGAC TTACACACAG AAATTCTAA
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| Protein sequence | MQTNSILAKA VRFALIGGAA TAALSASVAT AADDQAKVER IEVTGSRIKR TDMEGSSPVT
TIDASAIEKT GELSMADVLR RSNLNTFGST SENSGSAQQS QATINLRGAG SDRTLVLLNG
KRMPGSPTLG GTAVNLNTIP TAAIERIEVL TDGASAVYGS DAVAGVVNII TKKNFDGVEV
STTATDPVQG GGEEWKTHIV GGLTGDKGSM TFSFEHLNRE IIYQRDRWFT SSSNVLAPKF
DDATGVSKYA RNFLDGKTGQ FSPMAACNNP KMVGAGHVYD AGGGDRVCGY DYTSEAADHA
SRTYTAGYVN SEYELSDEVV FQGQGLFSRN ETFGRYAPAA GWFNVAANQL DIQNFDAAGN
LTGVSKNPNA GKAYYRFTDV GTRDGNTTDY STDIQLALVG SHDDFGWDVT YHYNLAENTN
SGTGYVHRPT VEQYVKDGIF NFGPEGNSQS VIADIAHNTL KQDIMKFQSI NAGLNFEYLE
LPAGAVSWYL GTEASQYKYD AKVDAQTAAG DVIGSSGNGS QGDRDVYAVF AESIVPVSED
VELNFAYRYD KYSDFGSATT PKVAIRYQAL EDVVVRASWG QGFRAPSLSD LLAADALSAD
MATDYSYCDV LGTAVADCKA KQYDVTRQAN SELEPETSDF YNLGVIWDIT DNLSTKVEYY
NLSIDNVITF VSLDSLLKEE QKVGYGNLSR GEIKRVNNNP NGKLLSATTP KANGTGFDTT
GIDFNITYSG FETAIGEFGT SYDLTYVLSY DDEEYFDGPV NDKIGRNGKP EIRFTWVLDW
SYGDHSASLL TQYIDGQSEK TNPTDFSQVG NLSSQTTFDV SYGYHTSWDG KFGLGIRNLT
NQDPVLDSDL EYDSSLYNLY GRTFTATYTQ KF
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