| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2386 |
|---|
| Symbol | |
|---|
| ID | 4018884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2838864 |
|---|
| End bp | 2839733 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637956413 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563389 |
|---|
| Protein GI | 91793738 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000122506 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAA ACAAGATAAA GCGTTCGTCA TCCATGGTTG GCTTGGGGCT AAGGCGAGAA
ATGTTGACAG AGTTTTGCAC TCATAGCCCA AAAGAAATTG AATTTTTTGA AGTGGCTCCA
GAAAACTGGA TGACCTTAGG CGGTAAGTAT GGCCGTCAGT TTCGACACTT AACTGAGCAG
CATCCTTTTT TTTGCCATGG TTTATCTTTA TCCATCGGCA GTCCTGCAGC GCTGGATGTC
GACTTTGTTA AAAGGGTAAA GGCCTTTCTC GATAGCCACA AGATAGACAT CTACTCAGAG
CATTTAAGTT ACTGCTCAGG CACGGGTCAT ATGTATGATT TAATGCCCAT CCCCTTTACT
GAAGAAGCTG TCAAGCACGT TAGCCAGCGC ATTAAACAGG TTGAAGATAT TCTTGAACGG
CCCTTTATTC TAGAAAACGT GTCTTTTTAT GCCGCCCCTG GGGCGCAGAT GAGCGAGCAA
GCGTTTGTTA ATGCCGTGCT CAGTGAGGCC GATTGCAAAT TGCTGCTTGA TGTGAATAAC
ATCTATGTGA ATGCCATTAA TCATCACTAC GATGCCAGTG AATTTTTGGC CGCTATGCCC
ACAGATCGCA TCGCCTATCT GCATATAGCC GGACATTACC AAGAAGACGT GGACTTGATG
ATTGATACTC ATGGGGCGGA TATTATCGAC CCAGTGTGGG CATTATTGCA GGACTGTTAT
CGACTTCATG GGGTGCATCC CACCTTGCTT GAGCGTGATT TCAACATACC TAAAACCCCT
GTGCTGCTTC AAGAAATCAA TAAAATACAT GAATATCAGA CACAGGCTTT AGCCCAGTTT
AATAGTGCTC AGCCAAGGAG TGGTCAATGA
|
|---|
| Protein sequence | MPSNKIKRSS SMVGLGLRRE MLTEFCTHSP KEIEFFEVAP ENWMTLGGKY GRQFRHLTEQ
HPFFCHGLSL SIGSPAALDV DFVKRVKAFL DSHKIDIYSE HLSYCSGTGH MYDLMPIPFT
EEAVKHVSQR IKQVEDILER PFILENVSFY AAPGAQMSEQ AFVNAVLSEA DCKLLLDVNN
IYVNAINHHY DASEFLAAMP TDRIAYLHIA GHYQEDVDLM IDTHGADIID PVWALLQDCY
RLHGVHPTLL ERDFNIPKTP VLLQEINKIH EYQTQALAQF NSAQPRSGQ
|
|---|
| |