| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2366 |
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| Symbol | |
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| ID | 4018860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2815608 |
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| End bp | 2818091 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956389 |
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| Product | hypothetical protein |
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| Protein accession | YP_563369 |
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| Protein GI | 91793718 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.197088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTTC AGCTAGCCTG GCGATTTTTT AAACGTGAGT TAACACAAGG GCAACTGCTG
CTTATTGTAT TAGCCATCAC CTTGGCAGTG CTGTCGGTCA CAGGGCTTGC GCGGGTGAGC
GAGCGCTTAC AAGTGGCCAT CAATGGTGAA GCGGCAACCT TTATCGCCGC CGACAGAATT
ATTGACTCTC CCATAGCTCT TGATAACAAA ATACTCGACA TCGCCGCTAA ACTCGGCTTG
GCCCATGTGA CCAATATGCA ATTTAATTCC ATGGTGTATG CCGGAGATAA ATTTCAGTTA
GTGACCATTA AAGCGGTGGG GCCCGCTTAT CCGTTAAAGG GCGTGATTGA GCTGGCTTCT
GGTGAAACTA AGGCCTTGCC ACAATCGGGG GAGGCTTGGT TTGAGAATCG CCTTGGCGCG
CTGCTTGAGA ACCCGAAGTC AATTGAATTG GGTAATAGCG AACTTAAATT AACAGGCGAA
ATCAGTCGCT TACCCGATGG TGGCTTTAAC CCCTTCGCCT CAGCCCCTGT GCTCTTGATT
GCCCTTGAGG ATGTTGATGC CACTGGGATT ATTCAGCCGG GTAGCCGGGT GAGCTATTTG
TATCAATTTA CCGGTACGGC TTCGGCACTC AAGCAGTTTG AGGCAGAGGC AAAGCCCCTA
CTCAATAATA GCCAGCGCTG GGTTGATGTG CAGTCGGGAG ACTCCCCCAT AGCTTCTGCG
GTGAAAAAAG CCGAGCGTTT TCTATTGCTT GCCAGTTTGT TAGGCATTGC CTTGGCCTGC
GCCGCCATCG GGATTGCCGC CCAGCGTTAT TGCCAAAGGC ATTATGATGT GGTGGCCATG
CTAAAAACCT TTGGCGCCTC GGCTAAGCAA ATTCGACGCC TATTTGGTAT ACACCTATTA
TTAGTGACAG GGCTAGGAAT TGGTCTAGGT CTAGTGGGGG GCTTGCTGCT GGATTTAGGC
TTGACGGCCT TTTTACCCGC CGAAATTGCG GCCTATTCAC CGCCTTACAG CCGTCCTATT
CTCTTGGGCG TCAGCACTGG GCTTATCAGC GCCTTTATGT TCTCGGCCTA TCCATTAATG
CGTTTATTGG CCATTCCCCC CCTTAGGGTA CTGCAGCGCC AGCTTGAAGG GCTGCAATTG
GGTATGTGGC TGCATTTACT GCTGAGCTTA ACCGCCATGG CATTACTGGG CTACCTCTAT
TCAGGCAGTA TCCCTTTGAC CTTAACTGTG GTCTTTACTG TGCTATTACT GGGCACGCTA
TTAAGCCTGC TTGGCTTTGC CATGATCCGC ATGGGCCATA GTGTGGGGAT GAAAACCACT
AATCCACTGC AGTTGGCATT AGCAGGTCTT AGGCGCAGAG CCAGACAAAA TGCGCTGCAA
CTGGTGGGCT TTAGCAGTGC ACTTGTGCTG CTGTTGACTA TATTGGCGCT GCGCCAAGAC
TTACTTAATG AGTGGCAAAA ACAGCTGCCG GACAACGCCC CTAATTATTT CTTGGTTAAC
ATAGCCCCAG AAGATGCTAA ACCGCTTAAT GATTTTATGA ATGTTAACCA GATTGCTGCG
ACAGACATTT ACCCTGTGAT CCGTGGCCGC TTAACCCATG TGAATGATGA AGAGTTGATT
TCCGACGAGC AGCAAAAACA GGGTGAGGCA GGCAGAGTCG GTATTTCAAG GGAGCTTAAT
CTCACCTATA GGGACAGTTT GCCTCCTAAC AATAGCATCA CAGCAGGGAC CTTTAATCAG
CGCGATGATG AGGTTTCGGT GGAGACGAAA GTTGCTGAAC GCTTAGGACT TAACCTTAAC
GATACATTGA CATTCACCAT AGACAATCAG CTGGTTAAGG TGAAGGTTGC AAGCTTTAGA
AAGGTGCAGT GGGAGACCCT GCAACCTAAC TTCTTTATGA TTTTCACCCC CAAGGCACTC
GCCGATTTTT CCTATACCTC GATGGCAAGT TTTCATCTAG ACGATGACAA ACTTAAACAA
GCGGGCAGTG AGCTGAGTGA CAATGATGTG GTGCTGCAAC TGATTAAACG CTTCCCAACC
GTGTCTGTCA TAGATGTGGG CGCCATGGTG GGGCAGTTAA GACAAATTAT CGAGCAAGTG
TCGTTATCTT TATCCTTAGT GCTGGCACTG GTGCTACTCG CCAGCGCCTT AGTACTGATA
GCCCAAACTG AAGCCGGTAT GGCCATGCGC CAGCGAGAGC TTGCTGTGCT GCGAACCTTT
GGCGCATCGG GTTGGCTTTT GCGTTCGGCT ACCGGGCTTG AGTTTGCCTT GCTTGGCGCC
ATCGCTGGTT TACTCGCCGT GATAGTGGCG GAATTTGCAC TCTATATGCT GAAAACTCAA
GTGTTTGAAT TAGTGGTGTA TATGCATTGG CCTTGGTGGG CAATAGCCCC ATTAATGGGC
GCCTTGATCG TGGCGTTTCT CGGGGTGTGG CGCTGTCGTC AGCTGCTTAA TCAGTCCTGC
GGCGAGTTAT TAAAAGCCGG TTGA
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| Protein sequence | MEFQLAWRFF KRELTQGQLL LIVLAITLAV LSVTGLARVS ERLQVAINGE AATFIAADRI
IDSPIALDNK ILDIAAKLGL AHVTNMQFNS MVYAGDKFQL VTIKAVGPAY PLKGVIELAS
GETKALPQSG EAWFENRLGA LLENPKSIEL GNSELKLTGE ISRLPDGGFN PFASAPVLLI
ALEDVDATGI IQPGSRVSYL YQFTGTASAL KQFEAEAKPL LNNSQRWVDV QSGDSPIASA
VKKAERFLLL ASLLGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASAKQ IRRLFGIHLL
LVTGLGIGLG LVGGLLLDLG LTAFLPAEIA AYSPPYSRPI LLGVSTGLIS AFMFSAYPLM
RLLAIPPLRV LQRQLEGLQL GMWLHLLLSL TAMALLGYLY SGSIPLTLTV VFTVLLLGTL
LSLLGFAMIR MGHSVGMKTT NPLQLALAGL RRRARQNALQ LVGFSSALVL LLTILALRQD
LLNEWQKQLP DNAPNYFLVN IAPEDAKPLN DFMNVNQIAA TDIYPVIRGR LTHVNDEELI
SDEQQKQGEA GRVGISRELN LTYRDSLPPN NSITAGTFNQ RDDEVSVETK VAERLGLNLN
DTLTFTIDNQ LVKVKVASFR KVQWETLQPN FFMIFTPKAL ADFSYTSMAS FHLDDDKLKQ
AGSELSDNDV VLQLIKRFPT VSVIDVGAMV GQLRQIIEQV SLSLSLVLAL VLLASALVLI
AQTEAGMAMR QRELAVLRTF GASGWLLRSA TGLEFALLGA IAGLLAVIVA EFALYMLKTQ
VFELVVYMHW PWWAIAPLMG ALIVAFLGVW RCRQLLNQSC GELLKAG
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