| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2350 |
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| Symbol | |
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| ID | 4018844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2787173 |
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| End bp | 2789365 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956373 |
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| Product | transglutaminase-like protein |
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| Protein accession | YP_563353 |
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| Protein GI | 91793702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGATA ATTTTGACAG CCACATCGGC AGATCCACCC TGTTCTGGCT ACTGCTGACC
AATCTTGCCA TCTTGAGTCC ACTGTTTGAT AAAATCATGC CTTGGAGCAT AGGCATTTGC
GCCATTTGCT TTTTATGGCG AGTGGGGATT TATTTTGGAC GCGTTGCAGC GCCGCCTAAA
CTTCTGGTAA CCTCGCTCGC CATTGGCGCC GCCACCACCT TAGCCTTGGT CGCCAGTCAG
ATTGGCGCCC TCAATGCACT GGTCAACCTA TTACTGCTGG GTTATGCACT TAAATACATA
GAGATGCGGC AAGTCCGCGA CGTTAAAGTC TTAGTGCTAG TGGGCTACTT CCTGATTGGC
TTTAGCCTGT TAGAATACAA CTCAATCCTC AATACCTTGC ACTTGCTGTT AGTGAGCACC
ATCAACACTT GCGTGCTTAT CAGCCTGTAT CAAGAGCAAA GTCAGCCAGC GATGGAAAGC
CTCCCCGAGA GCCGCGACAA TGTAAGAATG ACTAGAACCA AATCTAGCCT GCTCAATCTT
TCTCAGTTCA AGTTCAGTCT TAAGCTGCTA GCTCAAAGCT TGCCACTGGC ATTAATACTG
TTCGTGGTAT TTCCAAGATT GCCCCCCTTG TGGCTAATGC CCAGTATGGA CAATGCCAGA
ACCGGCCTGA GTAACGAAAT GGCGTTTGGG GATATTAGTA AACTTACCCG CTCGGCTGAA
CTGGCCTTTA GGGTGGGTTT TGATAGCAAG TCCCAAGGCC GACTAGCCAA TCAGGATTTG
TATTGGCGCA CCTTAGTGTT AGATGAATAT GACGGTGAAA CTTGGCGGCA ACACCCCAGT
ATGCAAGCCA TACAAACCTT AGTCAGGCAA GTGAAACCCA CCCAGCCAAC GCCTGATCTT
CAAGGACAGA ATAACAAATC AATAGCCTAT AACATCATCA GTGAGCCCAG TTATCAAAAA
TGGCTCTATG GCTTAGATGT CGCCACCAGT GACGATCCTA AACTCACCAT GCTACCGGAT
CATCGTCTCT ATGCCTTAAA CGACATCACC CAGCGCTTTA GTTATGCTGT GGTGTCCTAC
CCCAATGCCG TGATGGACAG AGAATTATCT AAAACCATCG CCTCCATCAG CCTGCAATTG
CCTAAAGGAT TAAATCCACA AACCTTAGCC TTAGCGGCGC AGTTTAAACG CAACTACCCC
GAGCCTAAGG ACAGACTCGC CGCCATGATG GGTTATTTTA ATCGCCAAGC CTTCTTCTAT
ACCTTGTCAC CGCCCTCCCT TGGCAAGCAG CAAGTGGATG ATTTTCTGTT TAACAATAAA
GCGGGGTTTT GCGCCCATTA CGCCTCGGCG CTGGTTTATA TGGCAAGGGC GACAGGACTT
CCCGCCCGCG TAGTGACAGG CTATCAAGGC GGCGAATATA ATCCCGAGGC GGGTTATTAC
AGTGTGTATC AATACATGGC TCATGCTTGG GCCGAAGTCT GGCTAGAGGG CCAAGGTTGG
CAGCGTTTTG ATCCCACTGC CATGATAGCC CCTGAGCGCA TTCTCGATGG TTTTGATGCA
AGTTTTGATG GCGCCTCTAG CTACTTATCG GACACACTGT TTACCAGCCT ACGCTTTAAG
CACACGCCTT GGCTTAATGA GCTCAGGTAC AAGCTTGCAA GTCTAGATTA TTACTGGAGT
CTGTGGGTCT TAGGCTTTGA TGAGACTAAA AAGCAGCAAG TGTTAGACAA GCTTTTTGGT
GATATCAGCC TAAGTCAGCT GGCGATGATT ATCTTAGGGC TAAGTAGCAT CATCTTGCTT
CTCATCGCTT ATTCTGCCGG ATTATTGCAT TTCTCCTTTG AGGATAAGCT TAATCGACGC
TACCTCAGTA TTTGTCAGCG GCTGATTAAC AAAGGACTTG TCGAGACTAA AGCTCAAGTT
AATTCCCAAG CGCCATTGGC ACCTATTGCG CCAATGGCTC CTATTACGCC GATGACTCCT
ATTACGCCGA TGGCACCGCC CCAGCGCTTT GCCGCAGAAA TTGCCCCTAA GCTAATTCAA
TTCAGCCCCA AACTTGCCAA ACAGTTTGCC GGTTTCAGTG AGCTTTATAT TGCGCTTAAA
TATCAAGACT TGCCGCCAAA ACAGCACAGA CTTAAGCAAA AACGCTTCCA CGCCTTGTAC
CGCAAGCTAA GATTTGGGCT TTTAGTTAAC TAA
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| Protein sequence | MQDNFDSHIG RSTLFWLLLT NLAILSPLFD KIMPWSIGIC AICFLWRVGI YFGRVAAPPK
LLVTSLAIGA ATTLALVASQ IGALNALVNL LLLGYALKYI EMRQVRDVKV LVLVGYFLIG
FSLLEYNSIL NTLHLLLVST INTCVLISLY QEQSQPAMES LPESRDNVRM TRTKSSLLNL
SQFKFSLKLL AQSLPLALIL FVVFPRLPPL WLMPSMDNAR TGLSNEMAFG DISKLTRSAE
LAFRVGFDSK SQGRLANQDL YWRTLVLDEY DGETWRQHPS MQAIQTLVRQ VKPTQPTPDL
QGQNNKSIAY NIISEPSYQK WLYGLDVATS DDPKLTMLPD HRLYALNDIT QRFSYAVVSY
PNAVMDRELS KTIASISLQL PKGLNPQTLA LAAQFKRNYP EPKDRLAAMM GYFNRQAFFY
TLSPPSLGKQ QVDDFLFNNK AGFCAHYASA LVYMARATGL PARVVTGYQG GEYNPEAGYY
SVYQYMAHAW AEVWLEGQGW QRFDPTAMIA PERILDGFDA SFDGASSYLS DTLFTSLRFK
HTPWLNELRY KLASLDYYWS LWVLGFDETK KQQVLDKLFG DISLSQLAMI ILGLSSIILL
LIAYSAGLLH FSFEDKLNRR YLSICQRLIN KGLVETKAQV NSQAPLAPIA PMAPITPMTP
ITPMAPPQRF AAEIAPKLIQ FSPKLAKQFA GFSELYIALK YQDLPPKQHR LKQKRFHALY
RKLRFGLLVN
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