Gene Sden_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2344 
Symbol 
ID4018838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2779297 
End bp2779908 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID637956367 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_563347 
Protein GI91793696 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAA CCCAAGCTGG CCTGTTCTGG CTCAAAGTCC TCTTGCACCT GTTGTGCATA 
TTGCCTTTAG TATATTTAGT CTTGTTGGTG TCATCCGATA ACGCTGGCGG CGATCCTGTG 
CAGTACATCA TTCATTTCAC AGGTATGGGC GCCATTAATG TCTTGGTGGC GACCTTGTTA 
GTATCGCCTT TTGCGAAGCG CCTTAAACAG GGGTTATTAC TGCAGACCCG GCGTTTATTG 
GGGCTCTATG TGCTTGGTTA TGCTTTGCTG CACTTGAGTG CATTTATCAG TTTAGATTTA 
TTGTTCGCCT GGGGATTATT GTTTGAGGAA ATAGTAAAGC GGCCTTATAT CTTAGTGGGA 
GCAAGCTGTT TAATCATTTT GCTTATGCTT GGGTTGACGT CCTTTCATCG CGTGAAGCGC 
ACCATGGGCA AACGCTGGCA GGCGTTGCAT AACTGGGTCT ACCTTGCGGC TATACTCGCG 
CCGGTGCATT TTTATTGGTC GGTAAAGTCG GAGATTATTG AACCTGGCAT CTATTTGCTA 
ATTTTTACTG GGCTCTTGCT GCTGCGCCGT CATATTTTGA TGAAACGTTT AGGCTTTTTG 
CAGCAAAGGT AA
 
Protein sequence
MRLTQAGLFW LKVLLHLLCI LPLVYLVLLV SSDNAGGDPV QYIIHFTGMG AINVLVATLL 
VSPFAKRLKQ GLLLQTRRLL GLYVLGYALL HLSAFISLDL LFAWGLLFEE IVKRPYILVG 
ASCLIILLML GLTSFHRVKR TMGKRWQALH NWVYLAAILA PVHFYWSVKS EIIEPGIYLL 
IFTGLLLLRR HILMKRLGFL QQR