| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2310 |
|---|
| Symbol | |
|---|
| ID | 4018802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2735625 |
|---|
| End bp | 2736065 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956332 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563313 |
|---|
| Protein GI | 91793662 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3085] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000910912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC AATCATTTAC CCCAACTCTA GGTAGTGAAG CAATCGCAGC GAATACTGGG
ATGAGCTTTG TGTCTACTAA ACGCTTCTAT GATGATGCTA ATTTTCCGAA AGGTTTTAAA
CGCTGCGGAG ACTTTACCAG CAAAGAAGCT GAATTACTTG AACTTCATGG CCATGCCATG
AAAAATTTAG TCGAAGGTAA ACAGCTTGCC TGCACCCCAG ATGAAGACCA ATTCATTCAA
GCGGCACAGG GCAACATAAC CCCAACGACT CAGTTTGAAT TATTGTGGGC CAAATACGTC
AAGCTAGCCA AGGGCAAGCC GTTTTACGCT GTAGTAGGCA CGGTTCACGC TCCAAGTGCC
AAAGCCGCTG TAGAAGTGGA TATCGAATTT GATGACATCG ACGATGATAG CGCCAGTGAT
GAAGAGCCTG AGGCAGACTA A
|
|---|
| Protein sequence | MTQQSFTPTL GSEAIAANTG MSFVSTKRFY DDANFPKGFK RCGDFTSKEA ELLELHGHAM
KNLVEGKQLA CTPDEDQFIQ AAQGNITPTT QFELLWAKYV KLAKGKPFYA VVGTVHAPSA
KAAVEVDIEF DDIDDDSASD EEPEAD
|
|---|
| |