| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2303 |
|---|
| Symbol | |
|---|
| ID | 4018795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2728793 |
|---|
| End bp | 2730352 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637956325 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_563306 |
|---|
| Protein GI | 91793655 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TTCTCCGTCA TAAAACCAGT AGCCATAAGG CTGATATTTT ATCAGGCCTG
ACTGTGGCAC TGGCCCTTAT TCCAGAAGCC GTAGCTTTTG CGTTCGTGGC TCACGTGGAG
CCCATGGTCG GCCTGTACGC CGCCTTTATT ATGGGATTAA TCACCGCCGT TATTGGTGGA
CGTCCTGGGA TGATTTCTGG CGCTACCGGC GCTATGGCCG TGGTCATGGT GTCTTTAGTG
GTGGAACACG GAGTGCAATA TTTATTCGCT GCCGTGGTCT TAGCCGGGAT AATCCAAATA
AGCGCCGGCG TGTTTAAGCT AGGTAAGTTT ATTCGCATCG TGCCCTACCC AGTCATGATA
GGCTTTGTGA ATGGCCTCGC GATTGTGATT TTCTTAGCCC AACTTGGCCA GTTTAAAGTC
AAAGACGCGG CCGGCAACAT GGTATGGATG GCTCAGGAGC CATTAATGCT AATGTTAGGC
TTAGTGGCGC TTACCATGGC GATTATTCAC TTTCTGCCTA AGTTAACCAC CGCCATACCC
TCATCGTTAG TGGCTATTTT AACTGTCACC GCCATAGTGG TTGGCATGGA TTTAGATACC
CGCAATGTAC TTGATTTCCT AAAAACAATG AGCGGAAATG ACAGTGCGAC CATTGCAGGC
AACTTGCCAT CCTTTGCCAT CCCAAGCGTG CCGTTTAATT TTGAAACCTT CTATATTATC
TTGCCTTATG CTTGTATTTT AGCGGCAGTC GGCTTAATCG AATCGCTTCT GACGTTAACG
GTTATCGATG AGATGACCAA TAGCCGTGGC CGTGGTAACA AAGAATGTGT TGGACAAGGC
GTAGGTAACA TCACCAGCGG TTTCTTCGGA GCCATGGGCG GCTGTGCCAT GATTGGTCAG
TCGATGATCA ACATTAACTC AGGTGGCCGC GGCCGTTTAT CTGGGATAAC GGCTGCCATA
GCCTTACTGG CGTTCATCTT ATTCGGCTCA GCCTTTATTG AAATCATTCC TCTGGCCGCA
TTGGTGGGCG TGATGTTCAT CGTGGTGCTG GGTACGTTTG AATGGGCAAG CTTTAATGTG
ATGAACAAGG TGCCTAAGCA CGACGCGTTT GTCATCATAC TTGTGACCAC AGTGACTGTG
TTTACCGACT TAGCCTTTGC GGTATTTGTT GGCGTCATCG TTTCAGCGCT GGTGTTTGCA
TGGGAACACG CGAAACACAT CAATGTTGAG AAAAGTATCG ATGCTAATGG CTGGAAAGTG
TATCGCTTAA ATGGGCCACT GTTCTTTGGC TCAGTGGCAA ACTTCCTAGA CTTGTTTGAT
GCCGCAGACG ATCCACAAGA TATTATCGTT GATTTTCAAA ATTCTCGAGT TGCCGATCAC
TCAGCACTCG ATGCCATAGA CACGCTAGCG GAGCGTTATG TGGCCGCAGG CAAGCGTCTG
CACTTACGTC ACTTAAGTCA AGATTGTAAA GCCTTGCTAC ACAAGGCCCG CGACTTAGTG
GAAGTAAACC AAATTGAAGA TCCTCACTAC AAAGTGGCCG ATGATAAACT AGATTCATAA
|
|---|
| Protein sequence | MFDLLRHKTS SHKADILSGL TVALALIPEA VAFAFVAHVE PMVGLYAAFI MGLITAVIGG
RPGMISGATG AMAVVMVSLV VEHGVQYLFA AVVLAGIIQI SAGVFKLGKF IRIVPYPVMI
GFVNGLAIVI FLAQLGQFKV KDAAGNMVWM AQEPLMLMLG LVALTMAIIH FLPKLTTAIP
SSLVAILTVT AIVVGMDLDT RNVLDFLKTM SGNDSATIAG NLPSFAIPSV PFNFETFYII
LPYACILAAV GLIESLLTLT VIDEMTNSRG RGNKECVGQG VGNITSGFFG AMGGCAMIGQ
SMININSGGR GRLSGITAAI ALLAFILFGS AFIEIIPLAA LVGVMFIVVL GTFEWASFNV
MNKVPKHDAF VIILVTTVTV FTDLAFAVFV GVIVSALVFA WEHAKHINVE KSIDANGWKV
YRLNGPLFFG SVANFLDLFD AADDPQDIIV DFQNSRVADH SALDAIDTLA ERYVAAGKRL
HLRHLSQDCK ALLHKARDLV EVNQIEDPHY KVADDKLDS
|
|---|
| |