Gene Sden_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2275 
Symbol 
ID4018767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2699715 
End bp2700356 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID637956297 
ProductYceI 
Protein accessionYP_563278 
Protein GI91793627 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000000110231 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG CATTGAAACA TGGACGGATA CAAAGATTTA TCAACCCTTT GCTGACATTG 
AGTCTGTTAA CTTTCGCTGC TGTGAGCGCT GGGGTACACG CTGAAAATTG GCAGGTTAAT 
GCTGGTCACT CCAACATCAG CTTTGTATCT ACCAAGAAGG TCGACATCGC CGAAGTGCAC 
AGGTTTAAAC AGCTGCAGGG CAGCCTTAGC GAACAAGGCC AGTTGGCATT AGTGGTAGAT 
TTAGCCAGTG TCGATACTGG CATTAGCATT CGCGATGAAC GCATGGCAAG CCTGCTGTTT 
GAAGTGGCTA AGTTTCCTAA GCTTGAACTT ACAGCTCAGG TGAACCCTAA ATTAATCGAT 
GACTTGCCCT TAGGGGCAAC CTTAGTCACA CAAGTGGCGG TGAAAATTCA CCTTCATGGA 
TTAGAGCAAA CTAAGGATAT CGATGTGCTG GTGGCCAAAT TAACCCCTAG CAAGCTTGTG 
GTCACTAGCA TGAAACCTGT GATTGTGATG GCAGATGAAT TTAATCTCGG AGCAGGGGTT 
AATAAATTAC GGGATATCGC CGGCCTGAGT AGCAGTAGCA TTAGCATGTC AGTGCCAGTT 
TCATTTGTGC TAACCCTGTC GCAGAAAGTA TCAAATAAGT AG
 
Protein sequence
MKNALKHGRI QRFINPLLTL SLLTFAAVSA GVHAENWQVN AGHSNISFVS TKKVDIAEVH 
RFKQLQGSLS EQGQLALVVD LASVDTGISI RDERMASLLF EVAKFPKLEL TAQVNPKLID 
DLPLGATLVT QVAVKIHLHG LEQTKDIDVL VAKLTPSKLV VTSMKPVIVM ADEFNLGAGV 
NKLRDIAGLS SSSISMSVPV SFVLTLSQKV SNK