Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2227 |
Symbol | |
ID | 4018719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2645211 |
End bp | 2646500 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956249 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_563230 |
Protein GI | 91793579 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCACAG ATAACAAGCT CAGTGGCATC ATAGCGAAGA AACACAGCTT CAGTGTCCCA CTGGATTACC AACAAAGCCC CAGTGAACAG ATAAACCTCT TTGTGCGTGA ACTTTCAAGT GTTGAACACC AAAATAAAGA ACTGCCCTAT TTGGTTTTCT TTCAAGGGGG CCCAGGGTTT GGCGCCGTTA GGCCTGTTGC CAATACCGGT TGGATAAAGC GCGCCTTAAC TCAGTATCGA GTCCTCTTAT TAGATCAAAG AGGCACCGGG CTTTCAACTC CTGTGAGCGC TGAGAGTCTG GCTCATTTGA CCTCCCAGCA GCAAGCTGAA TACCTAAGTC ATTTTCGAAG TGATAACATC ATTCGTGATG CAGAGCTCAT TCGCGCTAAA CTCAGCCCTG ATAGGCCTTG GAGCATTTTA GGTCAGAGCT TTGGCGGCTT TTGTGTGCTG CGTTATTTAA GTGCCGCCCC ACAAGGGCTG AAAGCCGCCT ATATCACTGG CGGCATTCCC TCCCTAGAAC GCAGTGCCGA TGAAGTCTAT CAAGCGACCT ATCAAAGAGT ATTAGCTAAA AATCAGGATT TTTTCAGCCG TTTTAGTGAT GCCAGAGAGC TTGCCAACAG GCTTGCCAGT CACATCAGTG AATATGAAGT ATTACTCAGT TCAGGGGAGC GCTTAACCGT TGAAATGCTG CAACTGTTAG GTATAAATCT TGGCATGGAA CAAGGCCCTG AGGGCGTGTA TTACTTGCTG GAACAAGCCT TAATCGACAC GGCCCAAGGG GTTAAAGTGA ATCCGCTGTT TTTGCATCAG TTTGGTCAAT TTTTAGATTA CAACACCAAC CCGCTGTTCG CCGTGCTGCA TGAGTCCATC TATTGTCAAA ATAGCGCCTC AAATTGGGCC GCTCATCGAG TGCGTGAACA ATATAGTCAG TTTAATTATC ACCTCGGCAA AGATTTATTG TTCACAGGTG AAATGGTTTA CCCTTGGATG TTCGATCAAT TCAGCCAACT TCAGCCCTTA AAAGAAGCCG CCGAATTATT GGCCGCGAAA TCAGACTGGC CAGCACTGTA TGATCTCGAG CAACTTAAAG CCAATACAGT GCCCGTCAGC GCCGCCATTT ACAGCGAAGA CATGTTTGTT GAGATGCAGT ACAGCTTAGA AACCACTAAA GATGTAGGCA GCCTTAAGTA CTGGCTGACG TCAGAATACG AGCACAATGG CATACGCATG GATGGCGAGC GAGTGCTGGA TAAGCTCATC GCCCTTAATA CGGGGCGAGA GCTGAGATAG
|
Protein sequence | MRTDNKLSGI IAKKHSFSVP LDYQQSPSEQ INLFVRELSS VEHQNKELPY LVFFQGGPGF GAVRPVANTG WIKRALTQYR VLLLDQRGTG LSTPVSAESL AHLTSQQQAE YLSHFRSDNI IRDAELIRAK LSPDRPWSIL GQSFGGFCVL RYLSAAPQGL KAAYITGGIP SLERSADEVY QATYQRVLAK NQDFFSRFSD ARELANRLAS HISEYEVLLS SGERLTVEML QLLGINLGME QGPEGVYYLL EQALIDTAQG VKVNPLFLHQ FGQFLDYNTN PLFAVLHESI YCQNSASNWA AHRVREQYSQ FNYHLGKDLL FTGEMVYPWM FDQFSQLQPL KEAAELLAAK SDWPALYDLE QLKANTVPVS AAIYSEDMFV EMQYSLETTK DVGSLKYWLT SEYEHNGIRM DGERVLDKLI ALNTGRELR
|
| |