Gene Sden_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2173 
Symbol 
ID4018665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2575654 
End bp2576097 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID637956197 
Productregulatory protein, MerR 
Protein accessionYP_563178 
Protein GI91793527 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGC TTAAAGGTTA CAGTGACTGG AAGGTCAAGT TGAAAATAAG TGAATTAGCA 
TCGACGGCTC AGGTATCGGT AAAAACAATC CGCTATTATG AGCAAATTGG GTTATTAAGC
GCCCCTATCC GCACCGCTAA TGGCTATCGT CATTACCAAC AAAAAGACAT AGACACATTA
ATATTTGTAA GACGGTGTCG AGAATTAAAT ATTGCACTGG ATGATATTAA GCGCTTAGTC
GATACACAAG ACGATCCCAA ATCATCCTGC TTATTGGTAG ATAATATCAT TGCTGAGCAA
CTCGCACGCA TTCAACAAAC CCAACGAGAA TTGGCATTAT TAGAACAATC ACTGGCCGCC
CTCGCCTCTT GCTGTAAAAG CCATCAGATT AAAGATTGCA GTATTTTGCA TACACTTAAA
ACAGGCAGCG GCTGCGCCTC ATGA
 
Protein sequence
MLELKGYSDW KVKLKISELA STAQVSVKTI RYYEQIGLLS APIRTANGYR HYQQKDIDTL 
IFVRRCRELN IALDDIKRLV DTQDDPKSSC LLVDNIIAEQ LARIQQTQRE LALLEQSLAA
LASCCKSHQI KDCSILHTLK TGSGCAS