| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2162 |
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| Symbol | |
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| ID | 4018654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2560854 |
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| End bp | 2562014 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956186 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_563167 |
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| Protein GI | 91793516 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTT ATGTAAAACA AGGTCAAATT CCCAACAAAC GCCATATTGC ATTCGAAAAA
GACAATGGCG AGCTTTACCG TGAGGAATTG TTCTCAACCC ATGGTTTTTC TAATATTTAT
TCCAATAAAT ATCACCACAA CATGCCCACC AAGGCATTCA GTGTTGCGCC TTATGCCCTA
AGTCATGGCG ATGTTTGGCA AGACTCACTC ATTCAGAATT ACAAACTCGA TTCGCGCCAA
GCCGATTGTG AGGGCAGTTT TTTTAGTGCC CGCAATAAAA TCTTCTTTAA TAATGACGTG
AGCTTATACA CAGCCAAAGT CACTGAAGAC ACCTCACAGT TTTACCGCAA CGCCTACGCC
GATGAAATCG TGTTTATTCA CGAAGGTGAA GGCGAGCTGT TAAGCGAATA TGGCGTGCTT
AACGTCATCA AGTGGGATTA CTTAATTATC CCCCGCGGCA CCACCTACCA GCTTAAATTC
ACCGATTACA GCAATGTGCG TTTATTTGTG ATTGAGTCTT TCTCCATGGT GGAAGTGCCT
AAGCATTTTA GAAATGAATA CGGCCAGTTA TTGGAATCTG CCCCTTACTG CGAGCGTGAT
ATTCGCACAC CAGAGCTTGC TGATGCCGTG GTTGAGCGCG GCGAATTTGC CTTGATCAGT
AAATTTGGCG ACACCTACCA AGAAACCACA CTCGAGTGGC ACCCATTCGA TTTAGTCGGC
TGGGACGGCT GCGTCTACCC TTGGGCCTTT AACATCGCGG AATACGCGCC AAAAGTGGGT
AAAATTCATT TGCCGCCCTC AGATCATTTA GTCTTCACAG CCCATAACTT TGTGGTATGT
AACTTTGTGC CAAGGCCTTA TGACTTCCAC CCAAAATCAA TACCCGCGCC CTATTACCAC
AATAATATCG ACAGCGACGA AGTGCTGTAT TACGTGGACG GCGACTTTAT GAGCCGCACC
GGTATTGAAG CAGGCTTTAT GACCCTGCAC CAAAAAGGCG TGCCTCACGG CCCACAACCT
GGCCGCACTG AAGCCTCCAT TGGCAAGAAA GAAACTTACG AATACGCTGT GATGGTCGAC
ACCTTCGCAC CACTGAAACT GACATCTCAT GTGCAAAAGT GCATGAGCCA AGATTACAAC
CGTTCTTGGT TAGAAGACTA A
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| Protein sequence | MPFYVKQGQI PNKRHIAFEK DNGELYREEL FSTHGFSNIY SNKYHHNMPT KAFSVAPYAL
SHGDVWQDSL IQNYKLDSRQ ADCEGSFFSA RNKIFFNNDV SLYTAKVTED TSQFYRNAYA
DEIVFIHEGE GELLSEYGVL NVIKWDYLII PRGTTYQLKF TDYSNVRLFV IESFSMVEVP
KHFRNEYGQL LESAPYCERD IRTPELADAV VERGEFALIS KFGDTYQETT LEWHPFDLVG
WDGCVYPWAF NIAEYAPKVG KIHLPPSDHL VFTAHNFVVC NFVPRPYDFH PKSIPAPYYH
NNIDSDEVLY YVDGDFMSRT GIEAGFMTLH QKGVPHGPQP GRTEASIGKK ETYEYAVMVD
TFAPLKLTSH VQKCMSQDYN RSWLED
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