Gene Sden_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2136 
Symbol 
ID4018628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2534423 
End bp2537032 
Gene Length2610 bp 
Protein Length869 aa 
Translation table11 
GC content52% 
IMG OID637956160 
Productchitinase 
Protein accessionYP_563141 
Protein GI91793490 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000620509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGA CTCAAATATC ATCATCAGCT TGGCTGGTGG CATCTGTGCT AGCATCGACC 
ATAAGTAGCG CTGCATTCGC AGCGGCGCCC GGTAAACCTA GCTTAGCTTG GGGTGAGACT
CAGTTCGCCA TTATCGACGT CAATCAATCA GCTACGGCTT ATAATCAACT CGTAACAGTA
AAAGATGCCG CCGCAGTCTC CGTCAGCTGG AGCCTCTGGA GTGGTAACGT GGGTGAACGC
GCCCAAGTGT TACTCAATGG CAATCAAGTG TGGGAAGGCG CATCAAGTGC TTCTGGCACG
GCGAACTTTA ACGTTAACGA GGGGGGCCGT TATCAGATGC AAGTGCAGCT GTGTAACAGT
GAAGGCTGTA CAGCCAGCGA TCCCAAAACG ATTATTGTCG CCGATACCGA TGGCAGCCAC
CTATTGCCAC TCAATGCACC ATTATTAGAG AATAACCGCC CCTATACCAA CCATTCTGGC
AAAGTGGTCG GCAGTTACTT TGTGGAATGG GGCGTCTATG GCCGCACATT TCCAGTGGAT
AAGATGCCAG CTCAAAACTT AACCCATGTG CTCTATGGTT TTACCCCCAT ATGTGGTGGT
GATGGCATTA ATGACAGCCT AAAAGAAATT GAAGGCAGTT TTCAAGCATT GCAACGGGCC
TGTAGCGGCC GTGCGGATTT TAAAGTCGCC ATTCACGATC CTTGGGCGGC AATTCAAAAA
CCTCAGTCGG GTGTGAGTGG CCATGCAGAC CCCTATAAGG GCAACTTCGG TCAATTGATG
GCACTCAAGC AGGCGCACCC AAATTTAAAA ATATTACCTT CGGTCGGTGG CTGGACCCTG
TCCGATCCTT TCTTCTTCTT AGGCGATAAA ACCAAACGCG ACACTTTCGT GGCTTCGGTG
AAGGAATTTC TACAAACCTG GAAATTCTTC GATGGCGTTG ACATAGACTG GGAATTCCCC
GGTGGTAGTG GCGCCAACCC TAACTTAGGT AATGCTAACG ACGGTGAAAC CTATGTCACT
CTGATGCGTG AACTGCGCGC CATGCTCGAT GAACTGAGCG CCGAAACCGG CCGTACCTAT
GAGCTAACCT CAGCCATCAG CGCCGGTGGC GATAAAATCC AGAAAGTCGA TTATCAGGCG
GCGCAGCAGT ATATGGATTA CATCTTCTTG ATGAGCTACG ACTTCAATGG CGGCTGGACT
AACACTGAAC TTGGACACCA AACCAACCTC TATGAGGCAA GTTGGGATCC CAATACCCGT
TACACCACAG ATAAAGGGGT AAAAGCCCTG TTAGGCCAAG GCGTTACCCC AGGTAAGATA
GTGGTTGGCG CCGCCATGTA CGGCCGTGGC TGGACTGGGG TAAATGGCTA CACCAGCAAT
AACCCCTTCA CGGGCACGGC GACAGGAAAA GTGAAAGGCA CCTGGGAGGA TGGCGTCGTG
GATTATCGCC AAATCGTTAA TAGCTACATG GGCAGCGGCT GGGCCTACAG CTATGATGAG
GTTGCCGAAG CTGCATCGGT ATTTAAGGCA TCAACCGGCG ACTTAATTAC CTTTGACGAC
TCGCGCTCAG TCAAAGCCAA GGGCCAATAT GTGCTCGCCA ATCAACTCGG TGGACTCTTT
GCATGGGAAA TAGATGCCGA TAACGGTGAC ATACTCAATG CCATGCACGA AGGGTTAGGT
AATGGTGAAG GCACGACGCC ACCTGTAAAT AAAGCACCCA TAGCCAATGC GGGCGCGGAT
GTGAATGTTA CAGGCCCAGC GGATGTGATG CTTAATGGTA GCGCATCAAG GGACCCTGAA
AATGCCATTC TCAGTTACCT TTGGACTCAA GTATCAGGGC CAGCAGTCAC AATCATAAAC
CCTAATATGG CAAAGGCATC GATTCAATTA GCCTCAACAC AGGCCAGTAT CACTTATGGT
TTTAGCCTTA AGGTGACAGA TCCACAAGGC CTATCGGCAA CAGATACTGT GCTTGTCACC
AACCGGGCCG CGACACCTAA CCAAGCCCCA GTGGTGAGTG TCACCGCCAG CGCGACGGTC
GAAGCGGGAA AAGTGCTCAG CATAGTCGCA AGCGCCTCAG ATCCTGACGG TGATCCCCTC
ACCTACGCTT GGACTGTCCC TGCTGGTATT TCGGCAACGG GGCAAAATAG CACCACTTTA
GTGGTAACTG GGCCCAATGT CACAGCAGCC ACCAGCTACG ACTTGAGTTT ATTGGTTTCC
GATGGCGCTT TAGATGCGAG CGCAGCCACT AAGCTAACAG TGACGCCTAA ACCGACGGGA
GGCTGTGATA TAACAGATCC GAATGCGGGC AATTATCCTG CTTGGCAAGC CAGCACAGTT
TATAACGCAG GCAATACCGT TAGTCACAGC GCACTCGTGT GGAAAGCTAA ATATTGGACT
CAAGGCAATC CCCCCTCTCG CACCGCAGAT CAATGGCAGT TGCTCAGCCA AGTACAGTTA
GGTTGGGATG CAGGCGTTGC CTATAACGGT GGTCAAACCA CCACCCATAA CGGTCGTGAG
TGGAAGGCGA GTTATTGGAC CAAAGGTGAT GTACCTGGCG TTGCTGCTGT GTGGGTGGAT
ATCGGTGAAG CTCGCTGTCA GTCACGTTAA
 
Protein sequence
MFKTQISSSA WLVASVLAST ISSAAFAAAP GKPSLAWGET QFAIIDVNQS ATAYNQLVTV 
KDAAAVSVSW SLWSGNVGER AQVLLNGNQV WEGASSASGT ANFNVNEGGR YQMQVQLCNS
EGCTASDPKT IIVADTDGSH LLPLNAPLLE NNRPYTNHSG KVVGSYFVEW GVYGRTFPVD
KMPAQNLTHV LYGFTPICGG DGINDSLKEI EGSFQALQRA CSGRADFKVA IHDPWAAIQK
PQSGVSGHAD PYKGNFGQLM ALKQAHPNLK ILPSVGGWTL SDPFFFLGDK TKRDTFVASV
KEFLQTWKFF DGVDIDWEFP GGSGANPNLG NANDGETYVT LMRELRAMLD ELSAETGRTY
ELTSAISAGG DKIQKVDYQA AQQYMDYIFL MSYDFNGGWT NTELGHQTNL YEASWDPNTR
YTTDKGVKAL LGQGVTPGKI VVGAAMYGRG WTGVNGYTSN NPFTGTATGK VKGTWEDGVV
DYRQIVNSYM GSGWAYSYDE VAEAASVFKA STGDLITFDD SRSVKAKGQY VLANQLGGLF
AWEIDADNGD ILNAMHEGLG NGEGTTPPVN KAPIANAGAD VNVTGPADVM LNGSASRDPE
NAILSYLWTQ VSGPAVTIIN PNMAKASIQL ASTQASITYG FSLKVTDPQG LSATDTVLVT
NRAATPNQAP VVSVTASATV EAGKVLSIVA SASDPDGDPL TYAWTVPAGI SATGQNSTTL
VVTGPNVTAA TSYDLSLLVS DGALDASAAT KLTVTPKPTG GCDITDPNAG NYPAWQASTV
YNAGNTVSHS ALVWKAKYWT QGNPPSRTAD QWQLLSQVQL GWDAGVAYNG GQTTTHNGRE
WKASYWTKGD VPGVAAVWVD IGEARCQSR