| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2134 |
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| Symbol | |
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| ID | 4018626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2532280 |
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| End bp | 2533017 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956158 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_563139 |
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| Protein GI | 91793488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000481379 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA CCCTGTTGAT CCCGGCCCGT TTCGGCTCTA GTCGTTTTCC GGGCAAGCCG
CTTGCCCCGA TTAATGGAAA GCCGATGATC CAGCACGTCT ATGAGCGTGC ATCCCTTGCC
AAAGGGCTAG ACGCTATTTA TGTGGCAACC GATGATGATC GCATTAAAGA TGCCGTTGAG
GCATTTGGTG GCAAAGTCGT CATGACTAGC GCCGCTGCCG CCTCAGGCAC GGATCGGATC
AACGATGCCA TAGAGCAGTT AGGCTTAAGC GACGACGATT TAGTCATTAA CCTACAGGGC
GACCAGCCTC TTATCGACCC GATTTCTATC GAGCAAATTG TTAGCTTGTT TGAACGTCAT
CCGGGTGAAT TCGAAATGGC TACCTTAGGC TTTGAAATCA CAGACAAGAG TGAACTTGAC
GACCCCATGC ACGTTAAAAT GGTGTTCGAT AATGACTTTA ATGCCCTATA TTTCTCCCGT
GCCCGCATTC CTTTTGGCCG TGACACCAAT GACTATCCTG TTTACAAGCA CTTAGGTGTA
TACGCCTATA CCAAACGTTT CGTGAATGCC TTCGCCAAGT TGCCATTAGG TAAGCTTGAA
GATTTGGAAA AGCTTGAGCA ACTGCGAGCC TTAGAATATG GCCATAAGAT CAAAGTGGCT
ATCAGCGCCT TCGATTCACC GGAAGTGGAT ACCCCAGAAG ATATCCGCAA GTGTGAGCAG
CGTTTAGCCG TCGACTAA
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| Protein sequence | MKVTLLIPAR FGSSRFPGKP LAPINGKPMI QHVYERASLA KGLDAIYVAT DDDRIKDAVE
AFGGKVVMTS AAAASGTDRI NDAIEQLGLS DDDLVINLQG DQPLIDPISI EQIVSLFERH
PGEFEMATLG FEITDKSELD DPMHVKMVFD NDFNALYFSR ARIPFGRDTN DYPVYKHLGV
YAYTKRFVNA FAKLPLGKLE DLEKLEQLRA LEYGHKIKVA ISAFDSPEVD TPEDIRKCEQ
RLAVD
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