Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2053 |
Symbol | |
ID | 4018545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2437171 |
End bp | 2438055 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637956077 |
Product | aminotransferase, class IV |
Protein accession | YP_563058 |
Protein GI | 91793407 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCCTC TGTGGACCAA TCAGCCAACT ACTAATGGCA CTGTTCATAG CACTGCTCAG GGTACAGCTC AGGGCACTGT TCATGGCACG ATTCAGGGTA TACACCCCTT AGACCGCGCC ATTGCTTACG GTGATGGCGT GTTTGCCACC ATGCGCAGTA ATGGCGAAAT TCTGTTTCTG GCCGATCATC TCGCCCGTCT GCAACAATCC TGCGCCCGTC TAGGGTTTCA CTGGCAAGCA TCGAATACAT TGATGTCAGA GTTAACTCAG CTGGCAGCGA CCTATCCTAA GCACTGTATC AAGCTGATTG TCAGTCGCGG TGTGGGAGGG CGAGGCTACC AGGCCCCCAT TTCCGTTTCA GCCACTGAGA TAGTGTCCGT CAGTGAAATA CCGTCTTTTT ATGGGCAATG GCAACAAACT GGGATAAGGC TTGCTTTAAG TGATATTCGC CTAGGTCAGC AGCCAAGGCT TGCGGGGATT AAGCATTTGA ATCGTTTAGA ACAAGTGCTG ATCAAGAGCC AAGTCTTGCC TCAGGGCATG GATGACTGGC TGGTGCTGGA CAGCCAAGAC AATGTTATCG AGTCTTCGGT GGCGAATCTA TTTGGCGTCA AAGATGGAAT TATTTATACT CCAGCGTTAC ATCAAGCTGG GGTATCCGGT GTCACACGAG AAATTATCAT CAAGGCGCTG CTGACCTTAG CACTTCCGCA AGGGCACACA GTCGTGGTGA GTGAGTTTAA ACAAGATTTT CTGATGAGTT GTGAGCATGT GTTTCTCAGT AATAGTTTGT TCGGCGTAGT CGATGTCACC GGGATTGATA ACCAAGGCTT TGCTCCTTGG CCCCAATCGG CTCAATTAAG GCATTCATTA GGGTTATCCC TCTAG
|
Protein sequence | MLPLWTNQPT TNGTVHSTAQ GTAQGTVHGT IQGIHPLDRA IAYGDGVFAT MRSNGEILFL ADHLARLQQS CARLGFHWQA SNTLMSELTQ LAATYPKHCI KLIVSRGVGG RGYQAPISVS ATEIVSVSEI PSFYGQWQQT GIRLALSDIR LGQQPRLAGI KHLNRLEQVL IKSQVLPQGM DDWLVLDSQD NVIESSVANL FGVKDGIIYT PALHQAGVSG VTREIIIKAL LTLALPQGHT VVVSEFKQDF LMSCEHVFLS NSLFGVVDVT GIDNQGFAPW PQSAQLRHSL GLSL
|
| |