| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2039 |
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| Symbol | |
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| ID | 4018531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2418072 |
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| End bp | 2421257 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956063 |
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| Product | hypothetical protein |
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| Protein accession | YP_563044 |
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| Protein GI | 91793393 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0319037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT CCCAGACCTC GCCCACTCGC CTTAAATGGC GTAACTCACG ATTTGTGAAA
GCCAGCATGC TGACTATTGT CAGTTACGCA GCCTTTGTGG CATTGTTAGG CTTAGCCTTA
CCCTTTTTTG CCCATGAACA CTTACCCAAG TGGCTAAGCC AACAATTAGG CCGAGAAGTA
CAAATCGATG TCATCAAACT GGACCCCTTC GAGCTTTCAG TTGAAATCGC CGCCATTAAA
ATTAAAGAAG CCGATGGCAA CACTGACTTT TTCAACTTGC AAAGCTTGTC CGCAGACTTT
GCCTTTTGGG ATAGCATAAA GCACGGCGGC TTAAGACTTA ACAGCGTTGA GATAACTCAA
CCCTCGGTCT CAGTAGCACG TTACGCCAAT GAAAAGTTAA ATATCAGCGA TATCGTACAC
AGGCTGCAAC AATTAACCGC AAATGATGCC ACAAAGCCTA AGGACGCATC CCCTGCTAAG
CCGCTAAGTT TTGCCATAGA AACGCTAGCA CTGACCCAAG GTCACTTTAC CCTTGATGAC
ATGAGCTCAG GCTTACAGCT CAATTATGCC GACATTACCA TTCGCTTAGA CAATGTGGAT
AGCCAGGGTT TGCTAGCCAA AACAACAAGC CCACAAGAGC AAGCTAATCT CTATGATATT
CACCTAAAAG GCGATGCTAA TAGCGAGTTT AAGACCAATG GCGCATTTCA ACTTGTGCCC
TTTAAGTTGC AAGGTGAGCT CAATGTCGAT GCTCTGCCAT TGGCGCAGTA TTGGCACGCC
GTTGATAAAT TATTTAAGGT CAAGCTTGAA CAAGGCCAGC TGAATGTGAA AGGCCACTAT
GCCCTTAGCC TTAGCAAGGA CCCACAAGCT GCGCTAACAT GGCGCGTTAA ACAGGGTAAA
CTCAGCGTAA ATCAGCTTCA AATCGATGAT AAACAGCAGA AAAAATCGAT ATTATCATTA
AATGCTTTAG TGCTTGAAAA TATCCGTGCA TCCAGCCAAG AGCGCAAGTT GTCTATCGAT
AGCCTGCAAA GTCATTCGGG AGTCTTGGCC CTTGTCCATG GTAAAGACGG TATAGATTTA
GTCGACTTAT TTAGCCCTGT GAATGCTGAG GCAAAGGCAA ATACGGCTAG AACTGAAACA
GAAACAGAAA CAGAAACAGA AACAGAAACT CAGGATGTTG CACTTCACAC TAACAAAGCT
AACTCGCTAG CGAAGGCTTG GACTGTCAGC CTAAAAAATA CCCAGATAAA AAACTATCAG
GTTAATTTAA CCGAAATGTC AGCCAGCGAA ACCCCAACCC AATGGCAGTT TAGTGATATT
AAGCTGACCA ATTCAGCTAT AGATCCCTCG CTGAGTTTAC CCCTTGATTA TCAAGTGTCG
ATGACCATCA ATGATGGCAG CATTTTTGAA TCCACAGGCC AAATAAAGCT CGATGAACGC
AGCCTAGACA GCCAAATTAA CCTCTCTAAC CTCAAATTAA CCCGCTTACA AGCTTACGTG
GCCCCCTTTA TCGATCTCAC TATTGAAGAT GGCACTTTAG GTGCCCAAGG TCAGCTTCAA
GTCAATGCAG AGGCTGTAGT CAAGTTTCAA GGTAAGGCGC AAGTATCTTC TTTTGCCATT
AAAGATAACT TAGTCAATCA GCCACTGATG AATTGGCAAG CCATGGATGT CACAGGCATT
AATTTTAATT CTGCTGATAA CCACATAGCG ATCGCCGACA TTGGCTTCGA TGCCCTGTTT
GCCAGACTGA TTATCACCGA AGATCAACGC ACCAATATCA GTGAACTGTT AATCACTCAA
CCGGCCGTTC CTCAATCCGC AGCGCCAAAG AAGCCAGTCA ATGACACAGG TCCTGCTGTG
GCTCAGATGA GCAAGGAAGG TGTGTTAGCG ACCCTAGACA AGATTGAGTC CAGCATTGAA
GCCAATAGCC AAAAATCAGG CCATCCCGCC CATAAGCCCC TCAGTTTTGA AATAGAGCGC
ATTCGCTTTG ACAAGAGTTC TGCTTTTTTT GCCGATAACT CCCTCAATCC CAATTTCAGC
TCGGGTATCG AGGAACTCAA AGGTGAAATC ACCAACCTTT CAAGCAAGCT AGACAGTCGG
GCCACTGTAC TTCTGGATGG CAAGATAGAT AAATACGCAC CTGTGGTGTT AAAAGGTAAG
GTAAACCCGT TTGCCAACAA GCCGTTTTTA GATGTCGACC TGTCCTTTAA ACGGGTAGAG
TTGACGTCGG TAAACCCCTA TTCCGGCACC TATGCGGGAT ATTATGTGGA TAAAGGCAAG
TTATCCCTAG ATCTTAATTA CCAACTAAAA GATGGCCAAT TACAAGGTAA AAACCATGTG
GTTATTGAGC AGCTAAAACT CGGTAAGCCC AGTAATTCAA AGTTAGCCAC TAGCTTACCT
ATCACCTTGG CCATCGCGTT ATTGCAAGAC AGGCATGGGG TGATTGACTT AGGCCTTGAA
GTCTCAGGCG ATATCAATTC TCCTAGCTTC AGTTTTGGCA ATATTGTTTT GGCTGCCATG
GGCAATTTAA TCACTAAAGT CGTCACCTCG CCATTCACCT TATTGGCAAA CCTCATTGGT
GCAACTGAAG ATGAATTGGA CATGATACGT TTCGATTATG GTGGCTTTAA TTTGCAAAAA
GATCAACGCC GCAGCTTACG TGCACTCTCT AAAGCGTTGA ATGACAGGCC ATTACTCACC
ATAGAGCTGA GAGGCAGTAT AGATCAAGCC AATGACAGGC AAGCATTAGC TGAAGCCGAA
TTGCATCGAC ACTTGGCCCG TATAGCTGGC CTGCCTTTGA ATGAATTACC TAAAAACCTT
AGCGCCAGTC AGTTTCCTTA CTCGGGTCCC CTAGTCGATG CCTTAATGTA TTATCTAGAG
ACAGAGCTTA TGCTCGCGCC TGAAACAGTG AAGCAAACAT TATTAACTGA AAGACCAGAG
CTGGATGACG AGCAAACGCG TATTCATTGG CATATCGCCT TGTATAACTT GGCGAAGAAA
CAGCAAAAAA TTGATAATCA AGCACTGAGC CAGTTAGCGC TCGCCCGCTC TCAAGCGGTC
AAGGCGTACC TAGTCGAAAA AGGAAAAGTG GATCCGGAAA GAGTCTTTTT ACTGGACAGT
AAAATGACGA TTAAACAGCA ACATAGCGCT CAAGTTCGGG TTAATTTAGA TGCAAGTAAA
GCCTAA
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| Protein sequence | MNSSQTSPTR LKWRNSRFVK ASMLTIVSYA AFVALLGLAL PFFAHEHLPK WLSQQLGREV
QIDVIKLDPF ELSVEIAAIK IKEADGNTDF FNLQSLSADF AFWDSIKHGG LRLNSVEITQ
PSVSVARYAN EKLNISDIVH RLQQLTANDA TKPKDASPAK PLSFAIETLA LTQGHFTLDD
MSSGLQLNYA DITIRLDNVD SQGLLAKTTS PQEQANLYDI HLKGDANSEF KTNGAFQLVP
FKLQGELNVD ALPLAQYWHA VDKLFKVKLE QGQLNVKGHY ALSLSKDPQA ALTWRVKQGK
LSVNQLQIDD KQQKKSILSL NALVLENIRA SSQERKLSID SLQSHSGVLA LVHGKDGIDL
VDLFSPVNAE AKANTARTET ETETETETET QDVALHTNKA NSLAKAWTVS LKNTQIKNYQ
VNLTEMSASE TPTQWQFSDI KLTNSAIDPS LSLPLDYQVS MTINDGSIFE STGQIKLDER
SLDSQINLSN LKLTRLQAYV APFIDLTIED GTLGAQGQLQ VNAEAVVKFQ GKAQVSSFAI
KDNLVNQPLM NWQAMDVTGI NFNSADNHIA IADIGFDALF ARLIITEDQR TNISELLITQ
PAVPQSAAPK KPVNDTGPAV AQMSKEGVLA TLDKIESSIE ANSQKSGHPA HKPLSFEIER
IRFDKSSAFF ADNSLNPNFS SGIEELKGEI TNLSSKLDSR ATVLLDGKID KYAPVVLKGK
VNPFANKPFL DVDLSFKRVE LTSVNPYSGT YAGYYVDKGK LSLDLNYQLK DGQLQGKNHV
VIEQLKLGKP SNSKLATSLP ITLAIALLQD RHGVIDLGLE VSGDINSPSF SFGNIVLAAM
GNLITKVVTS PFTLLANLIG ATEDELDMIR FDYGGFNLQK DQRRSLRALS KALNDRPLLT
IELRGSIDQA NDRQALAEAE LHRHLARIAG LPLNELPKNL SASQFPYSGP LVDALMYYLE
TELMLAPETV KQTLLTERPE LDDEQTRIHW HIALYNLAKK QQKIDNQALS QLALARSQAV
KAYLVEKGKV DPERVFLLDS KMTIKQQHSA QVRVNLDASK A
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