Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1994 |
Symbol | |
ID | 4018483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2359039 |
End bp | 2359626 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956016 |
Product | hypothetical protein |
Protein accession | YP_563000 |
Protein GI | 91793349 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000122059 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC TATTTGCCCA CCTAGCCCGC ATGAAACTTA TTCAGCGCTG GCCATTAATG TACAACGTGC GTCGAGAAAA TGTGCAGGAG CATTCACTGC AAGTGGCCAT GGTGGCCCAT GCGCTAGCCA TTATCAGCAA TAAAAAGTTT GCCACCCATT TAGATGTCAA CAAGACCGCC ACCATCGCCA TTTTCCACGA TGCCAGCGAA ATATTAACCG GCGACTTGCC CACCCCGGTT AAGTATTTCA ATAAAGAAAT CGAAGCCGAG TACAAGAAAA TTGAAGCCAT CGCCGAGCAG CGCATGTTGG AGATGGTGCC AGAGGAGTTC AAGCAAGACT ACTTGAGCCT GTTTGACAGC TCGGCTGCGG ATCCTGAGTA TAAAGCCCTA GTGAAATCCG CCGATACTTT GTGCGCCTAT CTTAAGTGTC TAGAGGAACA AAAAGCCGGC AACAGTGAGT TTAATAGTGC TAAGCAGCGC CTCGAGGCCA TGCTAGATGC CAACCCAAAC CCAGCGGTTA AATTTTTCAG GGACTGCTTT ATTCCAAGCT TTACCTTAGA TTTAGATGAA ATTAACCAGA TGCTCTAG
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Protein sequence | MSHLFAHLAR MKLIQRWPLM YNVRRENVQE HSLQVAMVAH ALAIISNKKF ATHLDVNKTA TIAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEQ RMLEMVPEEF KQDYLSLFDS SAADPEYKAL VKSADTLCAY LKCLEEQKAG NSEFNSAKQR LEAMLDANPN PAVKFFRDCF IPSFTLDLDE INQML
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