Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1928 |
Symbol | |
ID | 4018417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2285898 |
End bp | 2286785 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637955950 |
Product | transposase, IS4 |
Protein accession | YP_562934 |
Protein GI | 91793283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATT TAGTGGATGT ATTTTGTGAT GTCGATGATT TTTGTGCTGT ATTTATGCCG CAATGGAAAA AACAATGCGT AACAGATGGC ACGCGTAAGC GCCAACGTTC AAGCAGAATG AGCATGAGCG AAATAATGAC GATTATCATA CTCTTCCATA CATCTCATCA TCGTGACTTC AAAAATTACT ACACTGGATA TCTTGCTCGT TTTTTCAAAT CTGATTTCCC CCACTTACTC AGCTATACCC GTTTTCTTGA GCTTATGCCG ACAGCTGTCG TGCCACTATG CAGCTATTTC TCCAGCATCA GAAGTCTACC TACGGGGATT GAATTCGTCG ATTCGACCAG TGTAAAGGTT TGCCACAATT TGCGAATTCC ACGACATAAA ACGTTATCTG GCCTTGCTCG TCGCGGAAAA GGGACCATGG GGTGGTTCTA TGGTTTCAAG CTTCATCTCA TCGTTAACCA TAAAGGGGGG ATTGTTGCCG CCAAAATTAC TCCAGCCAAT ACCCATGACA CTAAGCCTGT TTCAGGCATG GTGGTGAATG CTATGGACAA GCTGTATGCG GATAAAGGCT ATATCAGTAA AGCGTTGGCA AGCGAGCTAC TTGAGCAAGG CGTAACACTA GTAAACAATG TTCGCAAGAA CATGAAAAAG AAGGTTTTAT CACTGTGGGA TAGGGCAATG CTTTCACGAA GATTTATTAT AGAAACGATC AATGATCAGC TTAAGAATAT CTCACAAATC GAGCATTCGA GGCATAGAAG TGTGCATGGT TTTATGCTGA ATATGATTGG CGGTTTAATT GCCTATCAAC TCAAAGAGAG TAAGCCACAA CTTAATATCA CAGATGTCGA TTTCAGTGCG ATTTCTGTTA TGGCTTAA
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Protein sequence | MDNLVDVFCD VDDFCAVFMP QWKKQCVTDG TRKRQRSSRM SMSEIMTIII LFHTSHHRDF KNYYTGYLAR FFKSDFPHLL SYTRFLELMP TAVVPLCSYF SSIRSLPTGI EFVDSTSVKV CHNLRIPRHK TLSGLARRGK GTMGWFYGFK LHLIVNHKGG IVAAKITPAN THDTKPVSGM VVNAMDKLYA DKGYISKALA SELLEQGVTL VNNVRKNMKK KVLSLWDRAM LSRRFIIETI NDQLKNISQI EHSRHRSVHG FMLNMIGGLI AYQLKESKPQ LNITDVDFSA ISVMA
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