| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1890 |
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| Symbol | |
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| ID | 4018378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2219617 |
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| End bp | 2220609 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955911 |
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| Product | methyltransferase, putative |
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| Protein accession | YP_562896 |
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| Protein GI | 91793245 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
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| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000006524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAGCT TTAGTTCCTT CTATCAACAA ATTGCCGATT CAACTCTCCA GCATTGGTTA
GAAGACTTGC CCGCCATTTT GGGTAAATGG CAGCGAGAGC ATAAACATGG CAATTTACCT
AAATGGGAAA AAGTGCTTAA TAAGCTAAAC TATGCTGAGC CTGATAGCGT AGACTTTGTC
GATTCAGTCA CCATAGGCAG CGGCAGTCAG TTAAGTGCTG GTCAGCAACA GAAGTTGGAG
AACCTACTCA GGTTATTTCA GCCTTGGCGC AAAGGCCCAT TTAATGTACA TGGTATAGAC
ATAGACACCG AATGGCGCAG TGATTGGAAA TGGCAGCGAG TACGCCAGCA CATTTCGCCG
CTGGCCAAAC GCACAGTCTT AGATGTGGGT TGTGGTAGCG GCTACCATAT GTGGCGCATG
CTTGGCGATG GTGCAGCTAG GGTGGTAGGC ATCGACCCTT CCCCGCTATT TTTGTGTCAA
TTTGAAGCCA TTAAACGCTT GGCGGGAAAT CAGCACCCAG TGCATTTATT GCCTTTGGGC
ATAGAGGAGT TACCCCCATT AGATGCCTTT GATACGGTAT TTTCCATGGG TGTGTTATAC
CACAGACGCT CTCCCATCGA TCACTTGTAT CAGTTAAGGG ATCAGTTACG CATGGGCGGC
GAATTAGTAT TAGAAACCTT GGTCATCGAC GGTGATGAGA ACACCGTACT GGTTCCTGAG
GACAGATACG GAAAAATGAA TAATGTCTGG TTCCTGCCCT CGGTAGCGGC ATTGATGTTA
TGGCTTAAGA AATGTGACTT TACCAACATA CGTTGTGTTG ATGTGGATAC CACCTCATTA
GCAGAGCAGC GCAGTACAAC TTGGATGCCA AATGAGTCAT TAGTGGACTA TCTTGATCCA
AAAGATATAA ATCTTACCAT TGAGGGCTAT CCAGCGCCCA AAAGAGCGAC GATAATCGCC
ACCAAGAATC AACCGAATTT TGATTTAATT TAG
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| Protein sequence | MISFSSFYQQ IADSTLQHWL EDLPAILGKW QREHKHGNLP KWEKVLNKLN YAEPDSVDFV
DSVTIGSGSQ LSAGQQQKLE NLLRLFQPWR KGPFNVHGID IDTEWRSDWK WQRVRQHISP
LAKRTVLDVG CGSGYHMWRM LGDGAARVVG IDPSPLFLCQ FEAIKRLAGN QHPVHLLPLG
IEELPPLDAF DTVFSMGVLY HRRSPIDHLY QLRDQLRMGG ELVLETLVID GDENTVLVPE
DRYGKMNNVW FLPSVAALML WLKKCDFTNI RCVDVDTTSL AEQRSTTWMP NESLVDYLDP
KDINLTIEGY PAPKRATIIA TKNQPNFDLI
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