Gene Sden_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1835 
SymbolinfA 
ID4018318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2162580 
End bp2162798 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content44% 
IMG OID637955852 
Producttranslation initiation factor IF-1 
Protein accessionYP_562842 
Protein GI91793191 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000358057 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAG AAGACAACAT TGAAATGCAA GGCACTATCC TTGAGACCTT GCCAAATACA 
ATGTTCCGCG TAGAGCTGGA AAATGGACAT GTGGTGATAG CCCACATTTC TGGCAAAATG
CGCAAAAACT ACATCCGTAT TTTAACGGGT GACAAGGTCA CTGTTCAGTT GACTCCTTAT
GACTTATCTA AAGGTCGTAT CGTCTTCCGC GCACGTTAA
 
Protein sequence
MAKEDNIEMQ GTILETLPNT MFRVELENGH VVIAHISGKM RKNYIRILTG DKVTVQLTPY 
DLSKGRIVFR AR