Gene Sden_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1798 
Symbol 
ID4018280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2126099 
End bp2126455 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID637955814 
Productregulatory protein, MerR 
Protein accessionYP_562805 
Protein GI91793154 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0455207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATAG GTGAAGTATC AAAAAAAACG TCTCTGTCCA TTAAGGCCAT CCGCTTCTAT 
GAGGCCAAAG GCTTGATCAA TCCCCCCCAG CGGCTAGGGC GTTATCGGGT TTACCAAGCC
GCCGATGTTG ATCTGCTTAT ACTGATTAAA CAAGCGAAGC AATTAGGGGT TAGCTTATCT
CAGTTAAAGG GGGTCATAGT CTACCAAGAC GGTAAGCTTG ATTGGTTGAG AATAAAACTG
TTTTTGGCGG AGCTTAGAGT GCAGTTGCAG GCAAAAATTG CTGATTTAAC GGCAAATATA
GCCAATATTG ATGAATGTAG CCGTCAAATA GACACTGAGC ACAGCCTGAG TGACTGA
 
Protein sequence
MYIGEVSKKT SLSIKAIRFY EAKGLINPPQ RLGRYRVYQA ADVDLLILIK QAKQLGVSLS 
QLKGVIVYQD GKLDWLRIKL FLAELRVQLQ AKIADLTANI ANIDECSRQI DTEHSLSD