Gene Sden_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1791 
Symbol 
ID4018270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2115813 
End bp2116823 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content42% 
IMG OID637955804 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_562798 
Protein GI91793147 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCC GCGTTGCTAT TAACGGCTAT GGCCGTATCG GTCGAAATGT TTTACGCGCA 
CTATATGAAA GTGAAAAAGA TTACCCCATT GAAATCGTCG CCCTAAACGA TTTAGGTGAT 
GCTTCAATTA ATGCCCACCT CACTAAGTAT GACTCTGTTC ACGGACGTTT TAATGCCAAA 
GTCGATCACG ATGAAGAAGC TATCTATGTC AATGGCGATA AAATACTCAC CTTCCAAGAA 
CGCGATCCAT CGAAGTTACC TTGGGCTGAG TTAAAGGTTG ATGTGGTATT TGAATGTACC 
GGTATATTCA CTTCAAAAGC GGCGGTTCAG CCACATTTAG AGGCTGGCGC GAAGAAAGTT 
ATCATTTCGG CTCCAGGTAA AAATGTCGAT GCAACTGTGG TATACGGCGT TAACCAAGAA 
GTATTAACAT CAGAGATGAC TGTAATTTCA AATGCGTCAT GTACCACTAA CTGTTTAGCC 
CCTATCGCTA AACCGTTAAA TGATGCCATT GGTATTGAAT CAGGTTTAAT GACGACTATT 
CATGCTTATA CCAACGATCA ACGTTTATCA GACGTGTACC ACACTGATTT ACGTCGTGCC 
CGTGCTGCTG CTATGTCAAT GATCCCAACT CAAACCGGTG CAGCAGCTGC TGTAGGGTTA 
GTGGTACCTG AATTACAAGG TAAATTTGAT GGTTTAGCGG TACGAGTGCC AACCGTTAAC 
GTATCCTTAG TGGATTTAAC CTTCTTAGCA TCTCGTGACA CTACGGTTGA AGAAATTAAT 
GAGATTGTGA CTCGTGCTTC AAAGCAAGGA CCAATGTCAG AAGTATTAGC CATTAATGAA 
GAGCCATTAG TGTCTATCGA CTTCAACCAC AATGCTTTCT CTTCTAATTT TGACGCAACA 
CAAACACGTG TCAACGGCCG TTTAGTGAAA GTCATGTCAT GGTATGACAA CGAATGGGGT 
TTCAGTAATC GCATGCTAGA TAACGCTGTT GCATTGATGA ACGCTAAATA A
 
Protein sequence
MTIRVAINGY GRIGRNVLRA LYESEKDYPI EIVALNDLGD ASINAHLTKY DSVHGRFNAK 
VDHDEEAIYV NGDKILTFQE RDPSKLPWAE LKVDVVFECT GIFTSKAAVQ PHLEAGAKKV 
IISAPGKNVD ATVVYGVNQE VLTSEMTVIS NASCTTNCLA PIAKPLNDAI GIESGLMTTI 
HAYTNDQRLS DVYHTDLRRA RAAAMSMIPT QTGAAAAVGL VVPELQGKFD GLAVRVPTVN 
VSLVDLTFLA SRDTTVEEIN EIVTRASKQG PMSEVLAINE EPLVSIDFNH NAFSSNFDAT 
QTRVNGRLVK VMSWYDNEWG FSNRMLDNAV ALMNAK