Gene Sden_1775 details

Gene Information

• Locus tag: Sden_1775
• Symbol: thiH
• ID: 4018254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2098071
• End bp: 2099180
• Gene Length: 1110 bp
• Protein Length: 369 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637955788
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_562782
• Protein GI: 91793131
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTCA CTGATGTTTT CTCAGCAATT TCACAAGATG ATTTGTTGTT GCAGCTTTAC 
AGTAAAAATA CTGCCGATGT AGAACGGGCG TTAATCGCCC CACAAGGCAA GCTTGAAAGC 
CTAATGACAC TATTGTCACC TGCAGCAGAG CCATTTATCG AAACGATGGC TACAGAGTCG 
GTGAGGTTAA CTCGGCAGCG TTTTGGCAAT AACTTAGGCC TCTACTTGCC ACTGTATTTG 
TCAAATTTGT GCGCCAATGA GTGTGATTAC TGCGGCTTTA CCATGAGCAA TAAAATAAAG 
CGCAAAACAT TAAACGAGTC TGAGTTACTG GCAGAAATAA GCATTATCAA GGCCAGAGGA 
TTCGATTCTA TCTTGCTGGT TTCCGGTGAA CATGAAAGCA AAGTGGGTAT GGGTTATTTT 
TCTTGGGCGA TCCCTATAGT TAAGGCCCAT TTTAGCTATG TAGCCATAGA AGTGCAGCCA 
TTAAGTGAAG CTGATTATAG TCATCTGAAA GAGTTGGGTG TCGATGCCGT GATGGTCTAT 
CAGGAAACGT ATCGGCCAGT AACTTACGCT AAGCATCATA CCCGAGGTCA GAAGAAGGAT 
TTTCATCATA GGCTAACAAC CCCTGACAGA GCCGCAAAAG CGGGTATCGA TAAAGTGGGC 
CTAGGCGTAT TATTGGGTTT AGATGATTGG CGATTAGATG CCTTGTTAAT GGGGCATCAT 
ATTGATTATT TGGAAAAAAA TTATTGGCGA AGCCGTTACA GTATTTCTTT ACCTAGGCTG 
CGCCCTTGCA CTGGAGGCGT TAATCCTAAA GTACCGCTGA CTGATCTTGG TTTAGTGCAA 
TTGATTTGTG CCTTTAGATT GTTTAATCCT CAGCTGGAAA TTAGCTTGTC TACCCGTGAA 
ACCCCCAGCT TACGGGACAG TTTATTGCCC CTTGGGGTGA CACATTTAAG TGCGGGGAGC 
TCGACACAAC CAGGGGGGTA TCAAGCACCT CAAACTCAGC TGGATCAATT TGAAATTAGC 
GATGGCCGTC CCGTGGATGC CGTTGTTGCA CAAATACAAC AACAGGGATT GAACCCAGTG 
TGGAAAGACT GGGAGGCGGG TTGGCATTAA 

 

Protein sequence

MSFTDVFSAI SQDDLLLQLY SKNTADVERA LIAPQGKLES LMTLLSPAAE PFIETMATES 
VRLTRQRFGN NLGLYLPLYL SNLCANECDY CGFTMSNKIK RKTLNESELL AEISIIKARG 
FDSILLVSGE HESKVGMGYF SWAIPIVKAH FSYVAIEVQP LSEADYSHLK ELGVDAVMVY 
QETYRPVTYA KHHTRGQKKD FHHRLTTPDR AAKAGIDKVG LGVLLGLDDW RLDALLMGHH 
IDYLEKNYWR SRYSISLPRL RPCTGGVNPK VPLTDLGLVQ LICAFRLFNP QLEISLSTRE 
TPSLRDSLLP LGVTHLSAGS STQPGGYQAP QTQLDQFEIS DGRPVDAVVA QIQQQGLNPV 
WKDWEAGWH