| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1747 |
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| Symbol | |
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| ID | 4018225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2067155 |
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| End bp | 2068441 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955760 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_562754 |
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| Protein GI | 91793103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.387448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGATC CTAAATTTTT GCGTACTGAA CTGGATGCCA CTGCTGAGCG TTTAGCCAGC
CGTGGTTTTG CCTTAGATAC CGCTCATTTG AGCCAACTGG AAGAGACCCG CAAGTCACTT
CAAGTGGAAA CAGAAGAATT GCAAGCATCC CGAAATGCGA TTTCTAAATC CATAGGTCAG
GCCAAATCTC GCGGCGAAGA CGTCAGTGCC ATCATGGCGC AAGTGGGCGA CTTAGGCAGC
AAGTTAGATG CAAAGAAAGC GGAACTTGCC GAGCTATTAC ACGCGATTAA CCTTATCGCC
ATGAGCACGC CAAACTTGCC AGATGAAAGT GTGCCTTGCG GTAAAGATGA AACCGAAAAC
TTAGAAGTGC GCCGTTGGGG CACACCAAGA AGCTTTGATT TTCCGGTTAA AGATCATTTA
GACCTTGGCG AAGCCTTAGG CGGGCTGGAT TTTAAAAGTG CGGTTAAAAT TACTGGCTCA
CGTTTTATTG TGATGAAAGG CCAGCTTGCA CGTTTAAACC GTGCGCTAGG CCAATTCATG
CTCGATTTAC ACACCCAAGA GCACGGTTAC ACAGAAACGT ATGTGCCCTT ATTGGTTAAC
GAAGACAGCT TGCTAGGCAC AGGTCAGTTG CCAAAATTTG GCGAAGACTT GTTCCACACT
AAGCCTGCCA CAGAAGAAGG CCAAGGCTTA AGCCTTATCC CGACGGCGGA AGTGCCATTA
ACCAACTTAG TGCGCGACAC TATCGTTGAA GTGAGTGATT TGCCATTGAA GTTCACGGCG
CAAACCTCAT GTTTCAGAAG TGAAGCGGGC TCTTACGGCC GTGACACCCG TGGCCTTATT
CGTCAACATC AGTTTGAGAA AGTAGAGCTT GTGCAAATCG TCAAACCTGA AGATTCGATG
CAAGCCCTAG AAGAACTCAC CTTACACGCC GAAAAGGTGC TGCAGCTATT GGGCCTGCCA
TACCGTACCA TGTTGCTCTG TACCGGTGAC ATGGGCTTTG GCGCCAGCAA AACTTATGAT
CTTGAAGTCT GGTTACCGGC GCAAAATACC TACCGCGAAA TTTCATCATG TTCAAACATG
AAAGATTTCC AAGCCCGTCG TATGCAGGCA AGGTATCGCA ATCCGGAAGA CAATAAACCT
GCGTTGCTAC ACACCTTAAA CGGTTCTGGC TTGGCTGTGG GTCGCACCTT AGTGGCAATT
TTAGAAAACT ATCAAAATGC CGATGGCAGC ATCACAGTGC CAGATGTGCT ACACAAATAC
ATGGGCGGCA CCACCCTTAT TGGTTAA
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| Protein sequence | MLDPKFLRTE LDATAERLAS RGFALDTAHL SQLEETRKSL QVETEELQAS RNAISKSIGQ
AKSRGEDVSA IMAQVGDLGS KLDAKKAELA ELLHAINLIA MSTPNLPDES VPCGKDETEN
LEVRRWGTPR SFDFPVKDHL DLGEALGGLD FKSAVKITGS RFIVMKGQLA RLNRALGQFM
LDLHTQEHGY TETYVPLLVN EDSLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLVRDTIVE VSDLPLKFTA QTSCFRSEAG SYGRDTRGLI RQHQFEKVEL VQIVKPEDSM
QALEELTLHA EKVLQLLGLP YRTMLLCTGD MGFGASKTYD LEVWLPAQNT YREISSCSNM
KDFQARRMQA RYRNPEDNKP ALLHTLNGSG LAVGRTLVAI LENYQNADGS ITVPDVLHKY
MGGTTLIG
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