| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1706 |
|---|
| Symbol | |
|---|
| ID | 4018184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2009048 |
|---|
| End bp | 2009434 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637955719 |
|---|
| Product | initiation factor 3 |
|---|
| Protein accession | YP_562713 |
|---|
| Protein GI | 91793062 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0298503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACCTTG TTGAAATCAG CCCAAATGCT GAGCCGCCTG TTTGTCGCAT AATGGACTAC
GGTAAGTTCC TTTTTGATAA GGCGAAAGCC CAGAAAGAAC AGAAGAAGAA GCAAAAACAG
GTCCAGGTTA AGGAAATAAA ATTCCGTCCT GGCACTGATG AAAACGACTA TCAGGTAAAA
CTACGCAACC TGATTCGTTT TCTGGAAGAT GGGGACAAAG CGAAAATTAC GCTGCGTTTC
CGTGGTCGCG AAATGGCACA CCAAAACCTA GGTATGGATC TTTTGAACCG TATCAAGGCT
GACTTGGAAG TATATGCGGT TGTTGAATCT TTCCCAAAAA TGGAAGGTAG ACAAGCAATT
ATGGTGCTAG CACCTAAAAA GAAATAG
|
|---|
| Protein sequence | MDLVEISPNA EPPVCRIMDY GKFLFDKAKA QKEQKKKQKQ VQVKEIKFRP GTDENDYQVK
LRNLIRFLED GDKAKITLRF RGREMAHQNL GMDLLNRIKA DLEVYAVVES FPKMEGRQAI
MVLAPKKK
|
|---|
| |