Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1677 |
Symbol | |
ID | 4018153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1951093 |
End bp | 1951794 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637955688 |
Product | lipoprotein releasing system, ATP-binding protein |
Protein accession | YP_562684 |
Protein GI | 91793033 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000705959 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG CGTCGACCCG CTTATTAGCC ATTAATGCCG TGAGTAAAGT ATTTCATGAT GGTGCCTGTG AAACTCAGGT GCTCCATGAG GTGAATTTAA CGGTGCATCG CGGTGAGCAG CTTGCCATAG TGGGCAGTTC AGGTTCGGGT AAGAGTACCT TACTGCATAT TATGGGCACC TTAGAAAGCC CAACCTCTGG TACTGTGCTA TTAGAAGGTG AAAATTTACA CCAGCTGTCA TCCAAGCGCC AAGCGCAAAT TCGTAATCAA GATTTAGGCT TTATTTATCA GTTTCATCAC CTATTGCCTG AGTTTAGCGC CTTAGAAAAT GTGGCTATGC CGGCGTTTAT TCAAGGTAAG AATAAAGCTC AAACCTTGGC TGAAGCTAAA GCCCTGTTAG AACGAGTGGG GCTAGGTCAC AGATTAACCC ATTTACCCTC GCAATTATCC GGCGGTGAGC GCCAACGGGT GGCCATCGCA AGGGCACTTA TCAATAAACC TAAATTGGTA TTGGCCGATG AACCTACGGG GAATTTAGAC GCTGTCAGTG GGGAAGCTGT CTACGGACTT ATTCGTGAAC TTGCCGAGCA GCTTGGAACC GCCTTCGTGG TGGTGACTCA CGATGCCAAC CTTGCCGCCA GAATGGACAG ACAAGTGAAC ATGAAAGACG GCATCTTATC CCAGAGTGAG ACCCATCGAT GA
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Protein sequence | MKPASTRLLA INAVSKVFHD GACETQVLHE VNLTVHRGEQ LAIVGSSGSG KSTLLHIMGT LESPTSGTVL LEGENLHQLS SKRQAQIRNQ DLGFIYQFHH LLPEFSALEN VAMPAFIQGK NKAQTLAEAK ALLERVGLGH RLTHLPSQLS GGERQRVAIA RALINKPKLV LADEPTGNLD AVSGEAVYGL IRELAEQLGT AFVVVTHDAN LAARMDRQVN MKDGILSQSE THR
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