| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1670 |
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| Symbol | |
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| ID | 4018146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1941364 |
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| End bp | 1942227 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955681 |
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| Product | acyl-CoA thioesterase II |
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| Protein accession | YP_562677 |
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| Protein GI | 91793026 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000026944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG TATTAGACGA TTTGGTATCA TTGTTATCCC TAGAGCAACT TGAAATGGGC
CTTTATCGAG GTCAGAGCCA AGACTTGGGC TTTGGTCATG TGTTTGGTGG TCAAGTTATG
GGCCAAGCGT TAAGCGCGGC TAAACAAACC GTGGCCGATG ATCGCTTAGT ACATTCATTG
CATTCTTATT TCTTGCGCGC CGGCGATGAG AAACTGCCCA TAGTCTATGA CGTAGAAATC
ATGCGTGATG GCGGCAGCTT TAGTGCAAGG CGAGTGAAAG CGATTCAAAA AGGTCAGCCG
ATTTTTTATA TGACCTGCTC ATTTCAAACG CCCGAAAGCG GTTTTGAACA CCAAAGCGAG
ATGCCAAGCG TGCCAGGTCC TGAGGGCATA CTCAATCAAC GTGAGCTTGC CATGACCATG
GGGGATAAAG TCCCCCCTAA GATGTTAGAG AAATTTCTCG CCGATACCCC TATAGAGATG
CGAGTGGTTG AACCCGTTCA TCCTGTATCG CCAAAAATCA CTGAGCCTAA ACGTTATGTG
TGGTTAAAAG CCAGTGGTAG CTTACCAACA GATCCTAATA TGCAGGCCTC TTTATTGGCT
TATGCCTCAG ATTTCAATTT TTTAATCACC GCCACTCAGC CCCATGGCGT ATCCTATTTA
ACCCCAGGCA TTCGGATGGC GACCATAGAT CACTCCATGT GGTTTCATCG ACCCTTCAAG
CTCGATGAAT GGCTGCTTTA TAGCATAGAA AGCACGAATG CCAGTGGTGG ACGCGGCTTA
GTGAAAGGCC AATTTTTCGA TACCCAAGGT AACTTAGTGG CCTCGTGTAC TCAGGAAGGC
ATGATCAGGA TGAAAAGAGC ATGA
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| Protein sequence | MSQVLDDLVS LLSLEQLEMG LYRGQSQDLG FGHVFGGQVM GQALSAAKQT VADDRLVHSL
HSYFLRAGDE KLPIVYDVEI MRDGGSFSAR RVKAIQKGQP IFYMTCSFQT PESGFEHQSE
MPSVPGPEGI LNQRELAMTM GDKVPPKMLE KFLADTPIEM RVVEPVHPVS PKITEPKRYV
WLKASGSLPT DPNMQASLLA YASDFNFLIT ATQPHGVSYL TPGIRMATID HSMWFHRPFK
LDEWLLYSIE STNASGGRGL VKGQFFDTQG NLVASCTQEG MIRMKRA
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