Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1641 |
Symbol | |
ID | 4018116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1905432 |
End bp | 1906655 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637955651 |
Product | uracil-xanthine permease |
Protein accession | YP_562648 |
Protein GI | 91792997 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000923826 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGCC TGTTAATCCC ACTTCAAGGT GCACAAATGC TGTTTGTTGC ATTTGGTGCC CTCGTACTCA TGCCTTTGCT CACAGGGTTA GACACCAGTG TTGCCCTGTT TACCGCAGGT CTTGGTACCC TGCTATTTCA ATGGGTGACA AAACGGCAAG TGCCTATTTT TTTAGCCTCA TCCTTTGCGT TTATCGCCCC AATTCTCTAC GGAGTGCAAA CCTGGGGGAT CCCCGCCACC ATGGGGGGCT TAATGGCCGC AGGTGTGGTT TACTTGTTAT TAGGCTTGAT GGTGAAAGTC CGTGGTAGCG GCTTTATTAA TACCTTACTG CCTCCCGTCG TTGTAGGGCC TGTGATCATC ATCATAGGTC TAGGACTTGC ACCCGTAGCG GTGAATATGG CATTGGGCCG CTCAGGGGAT GGCAGCATTG AAATTGTGGC TCAATCTACT GCCTTGATCA TTTCATTGCT GGCATTATCG AGCACCATTA TCGTGGCCGT ATTTTCAAAG GGCATACTAA AGCTAATGCC AATACTGGCT GGAATTCTAG TGGGTTATGC CGCCAGTTTA AGTTACGGTA TAGTGGATTT TAGCCCTGTG ACTCATGCAG CTTGGCTTGC CATTCCCAAT TTTGTGGCCC CTGAATTCCA CTGGCAAGCC ATTGCCTTTA TGATCCCTGT CGCCATCGCG CCTGCCGTTG AACACATAGG TGATATTTTG GCCATTTCCA ATGTGACAGG TAAAGATTTT ATCAAGAAAC CTGGGCTTCA TCGTACTTTA GCCGGTGACG GTATCGCCAC TATTGCGGCC TCTGCCTTAG GCGGGCCACC TAATACCACC TACAGTGAAG TCACTGGGGC CATCACACTC ACCAAAATTT TTGACCCAAA AATCATGACC TGGACGGCAG TAATAGCCAT TGTTCTCGCT TTTGTGGGTA AACTGGGGGC CTTAATGCAA ACTATCCCAG TGCCTGTCAT GGGCGGCATC ATGTGTCTGC TGTTTGGCTC TATCGCGGCG GTGGGGTTAA ATACCTTAAT TCGCAATCAA GTGGACTTAG CCGAGCCAAG AAACTTGAGC ATAGTTGGCG TGACCTTAGT ATTCGGCATT GGCGGCATGG CATTTGGTAT TGGTGAGTTT AGCCTAACTG GCATAAGCCT ATGCGGCATA GTGGCCATTG TAATGAACCT AGTGCTGCCC AAAGTGAAAA CAGTCGCAAC CTAA
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Protein sequence | MNRLLIPLQG AQMLFVAFGA LVLMPLLTGL DTSVALFTAG LGTLLFQWVT KRQVPIFLAS SFAFIAPILY GVQTWGIPAT MGGLMAAGVV YLLLGLMVKV RGSGFINTLL PPVVVGPVII IIGLGLAPVA VNMALGRSGD GSIEIVAQST ALIISLLALS STIIVAVFSK GILKLMPILA GILVGYAASL SYGIVDFSPV THAAWLAIPN FVAPEFHWQA IAFMIPVAIA PAVEHIGDIL AISNVTGKDF IKKPGLHRTL AGDGIATIAA SALGGPPNTT YSEVTGAITL TKIFDPKIMT WTAVIAIVLA FVGKLGALMQ TIPVPVMGGI MCLLFGSIAA VGLNTLIRNQ VDLAEPRNLS IVGVTLVFGI GGMAFGIGEF SLTGISLCGI VAIVMNLVLP KVKTVAT
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