Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1637 |
Symbol | |
ID | 4018112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1900636 |
End bp | 1901901 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955647 |
Product | hypothetical protein |
Protein accession | YP_562644 |
Protein GI | 91792993 |
COG category | [S] Function unknown |
COG ID | [COG2718] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0700293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATT TTATTGATAG ACGCTTGAAT GCAAAAGGCA AAAGCACTGT CAATCGGCAG CGTTTTATCG AGCGATATAA AAAACAAATC AAACAAGCCG TCAGCGATGC TGTGACTCGT CGCAGTGTGA CTGACATAGA CAAAGGTGAA AAGGTCAGCA TTCCTACCAA GGACATCAGT GAGCCCATGT TTCGCCAAGG AAAGGGAGGC GTACGTGAGC GTGTGCATCC TGGCAACGAT AGATTCAACC GCGGCGATAA AATTGATCGT CAAAAAGGCG GTGAAGGTGG ATCAGGTCAA GGTGAGGCGA GTGATTCTGG AGAGGGTGAT GATGATTTTG TATTTCAAAT TTCAAAGGAT GAGTATTTAG AACTGTTATT TGAAGATCTA GAATTGCCCA ACTTACAAAA AAACCGCTTA AATAAATTAG TGGAATATCA GATTTACCGC GCGGGCTTCA CCAACGATGG GGTTCCTGCC AACATCAATA TCGTGCGTTC ACTGCGATCA TCCCTTGCAA GACGCATCGC CATGTCGGCG GGTAAGAAAA AACAATTAGC GGTTTATGAG GCAGAACTTG AACTGCTTGA GAATACCCCC GGCGCCAAAG CCGAAGCCAT TCTGGAGTTA AAAGAGAAAA TCAGCGAACT GAAAAAGCAA ATAGCCAAAG TGCCTTTTAT TGATACCTTT GATCTGCGCT TTAATAATTT CGCCAAACGT GAAAAGCCCT CTAGCCAAGC TGTGATGTTT TGCTTGATGG ACGTCTCAGG CTCCATGGAT CAAGCCACTA AGGACATGGC TAAGCGATTT TATATCTTGC TGTACTTATT TTTAACCCGC ACCTACAAAA ATCTGGAGGT TGTCTATATC CGCCATCACA CTCAAGCCAA GGAAGTCGAT GAACATGAAT TTTTCTACTC TCAAGAAACC GGCGGTACCA TTGTATCTAG CGCCTTGAAA TTAATGCATG AAATACAGCA AGACAGGTAC CCCGCGAACG AATGGAATAT CTACGCCGCA CAAGCCTCAG ACGGTGACAA CTGGGCCGAT GACTCCCCCT ATTGTCGCGA CTTGCTGACC AATAAAATAT TGCCGCTTGT GCGCTATTTC AGTTACATAG AAATAACCCA TAGATCGCAT CAAACATTGT GGAATGAATA CGAAAAACTA CAACAAAGCT TCGACAACAT TGCTGTGCAG CACATCAAAG ACGCAGGAGA TATTTACCCC GTCTTTAGAG AGCTATTTAG AAAGCAAGCA GTATAG
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Protein sequence | MANFIDRRLN AKGKSTVNRQ RFIERYKKQI KQAVSDAVTR RSVTDIDKGE KVSIPTKDIS EPMFRQGKGG VRERVHPGND RFNRGDKIDR QKGGEGGSGQ GEASDSGEGD DDFVFQISKD EYLELLFEDL ELPNLQKNRL NKLVEYQIYR AGFTNDGVPA NINIVRSLRS SLARRIAMSA GKKKQLAVYE AELELLENTP GAKAEAILEL KEKISELKKQ IAKVPFIDTF DLRFNNFAKR EKPSSQAVMF CLMDVSGSMD QATKDMAKRF YILLYLFLTR TYKNLEVVYI RHHTQAKEVD EHEFFYSQET GGTIVSSALK LMHEIQQDRY PANEWNIYAA QASDGDNWAD DSPYCRDLLT NKILPLVRYF SYIEITHRSH QTLWNEYEKL QQSFDNIAVQ HIKDAGDIYP VFRELFRKQA V
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