| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1631 |
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| Symbol | |
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| ID | 4018106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1894062 |
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| End bp | 1895051 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955641 |
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| Product | membrane-bound lytic murein transglycosylase B |
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| Protein accession | YP_562638 |
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| Protein GI | 91792987 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00716763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTGCA AATCAGTAGT TGTATTTTGT GTATACCTAA CCTGCTGTAA CCTTGTTTCA
GCGCAGGAGA GCGGGGCGAC TTTCTCTGAT TATCTATCAG GGCTTAAGCG TGTCGCATTG
GAAGCTAACA TCTCGCCTAT GACCGTGGCG CAGCACTTTC CTAAAATCAA GCCTTTCAAG
CGTGCTCAAG GTCATAATAG TGTCTTCGAA AACACTAATC TAGAGCAATA CATCCCAAAG
AAAGTGCCTG ATATTCTCGT CAGTACTGGG CGCATTTTTT ATCAAGCCAA CGAAAAAGCT
TTTGATCATA TTGCTACTAA ATATGGGGTG CAACCGCGCT TTCTTATTGC CCTATGGGGC
TTGAGCTCCG ACTTTGGTGA ACGCCAAGGG CGTTATCCTG TGCTATCTGT GTTGGCCTCA
TCGGCTTTTG AAGCGAGTCT AAGCGGGCAA GTGGATCATT ATGGTGAATT ATTCTATATT
GATGAATTTA TTGCAGCTCT TAAAATTTTA GAACGCTATC CCTATCGCTT TGAAGATCTC
ACCAGTAGCC AGCAGGGCAC CATGGGTCAT ATGCAAATAA GACCAAGCCA GTTTTTAGCC
TATGCTAAAG ATGGCAGTGG TGATGGTCAT ATCGATATTT GGCATGATAT TAGCGATGCT
ATGACAACCA CAGCCAATAT GCTACAAGAC ATAGGCTGGC AATCTGACTC AACTTGGGGC
CGACAAATTA GGGCTACTAA AGCACTTAGT GCAGACAATA TCAGTCTTGC AGTGCAAAAA
ACCTTCTCTG AATGGCAACA ATTAGGCATA AGGCGCTTCG AAGGCGGTGA TTTGCCCAAT
CGTGACGATA TGCGGGTGTC CTTGCTCGCT CCCGATGGCA CAGATGGCCG CATGTATCTG
ATTTATTTTA ATTATCGGGC TCTTAAACGG GTCAATCAAG ATGATAAATA CTTATTGGCT
GCGACCTATT TGTCTGAAAG AATTAAATAA
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| Protein sequence | MFCKSVVVFC VYLTCCNLVS AQESGATFSD YLSGLKRVAL EANISPMTVA QHFPKIKPFK
RAQGHNSVFE NTNLEQYIPK KVPDILVSTG RIFYQANEKA FDHIATKYGV QPRFLIALWG
LSSDFGERQG RYPVLSVLAS SAFEASLSGQ VDHYGELFYI DEFIAALKIL ERYPYRFEDL
TSSQQGTMGH MQIRPSQFLA YAKDGSGDGH IDIWHDISDA MTTTANMLQD IGWQSDSTWG
RQIRATKALS ADNISLAVQK TFSEWQQLGI RRFEGGDLPN RDDMRVSLLA PDGTDGRMYL
IYFNYRALKR VNQDDKYLLA ATYLSERIK
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