Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1626 |
Symbol | |
ID | 4018101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1890635 |
End bp | 1891750 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955636 |
Product | ribonuclease D |
Protein accession | YP_562633 |
Protein GI | 91792982 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000103666 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAGCTT TCGAATATAT CAGTGATGAT GCCAGCCTTC GGGCACTTGT TGAGCAGTAT CAATCCAGCC CTCTATTAGT GTTAGATACA GAATTTGTGC GTACTCGTAC CTATTACGCT AGGCTAGGCT TGATCCAAGC CTTCGATGGC AAGACCTTAG CCTTAATCGA TCCGGTGGCT ATTGAAGATT TATCGCCGTT CTGGCAATTG TTAACCGCAC CTCATATCAC TAAGTTAGTG CATTCTTGCA GCGAAGATTT AGAAGTCTTT GCTCATTACG GTCATTGCCA ACCCGCGCCG CTGTTTGACA GTCAAATCGC CGCAAGTTTA GCGGGATTAG GTCATGGGTT AGGTTATGCT AAGTTGGTGC AAGAGTGCTT AAGTGTCGAG ATAGACAAAG GCGAGTCACG TACCGATTGG ATGAAGCGTC CACTGACTGA TGCGCAGCTG CAATATGCCG CTAATGACGT ATTCTATTTA TATAAACTCT ATCCTTTATT GCTTGAAAAG CTTAACGCCA ATGGCAGAGT CGAGTGGCTG CTTGAAGAAG GCCAGCGTAT GACACAAGAC AGATTATCTC TGCCAGATGG TGAAAGCGCT TATATCAAGG TGAAGAATGC CTTCCAGTTG TTGCCAGAAC AATTAGCTTA CTTGAAAGTA CTTGGGAAAT GGCGGTTAGA GAAAGCCTTA GCGAAAGATT TAGCCTTAGG CTTTGTGGTG AAAGACCATG CGTTAATTGC CTTAGCCAAG AAGCAGCCCA GTAGTGTTGC TGAGCTTAAT CGCATGACAG AGCTGACCGA GCAAGAAAAA CGTATTCACG GCCGCGATCT TATTCGTGTT TTGACGACGG CAGATCTTGA TAATTTACCT GAACAGCTCG ATGTCATCGC ATTGAAACCT GGCTATAAGT CGACCTTTAA AGAGATTAAA AACACCATTA CCAGCTTGTG TGAACAGGCG GATATCCCAG TGGAGTTTTT AGGCTCTAAG CGCCTAATTC ATGAGCTTTT GCTGTGGTTG TGGCATGGTA AAACGACATC AATGCCATTA TTGCTGACAG GTTGGCGCGG GGCTATCGTG GCTGATGCGC TAGCAGAGGT TAGTTTCTCG CAATAA
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Protein sequence | MLAFEYISDD ASLRALVEQY QSSPLLVLDT EFVRTRTYYA RLGLIQAFDG KTLALIDPVA IEDLSPFWQL LTAPHITKLV HSCSEDLEVF AHYGHCQPAP LFDSQIAASL AGLGHGLGYA KLVQECLSVE IDKGESRTDW MKRPLTDAQL QYAANDVFYL YKLYPLLLEK LNANGRVEWL LEEGQRMTQD RLSLPDGESA YIKVKNAFQL LPEQLAYLKV LGKWRLEKAL AKDLALGFVV KDHALIALAK KQPSSVAELN RMTELTEQEK RIHGRDLIRV LTTADLDNLP EQLDVIALKP GYKSTFKEIK NTITSLCEQA DIPVEFLGSK RLIHELLLWL WHGKTTSMPL LLTGWRGAIV ADALAEVSFS Q
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