Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1610 |
Symbol | |
ID | 4018085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1873536 |
End bp | 1874513 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955620 |
Product | hypothetical protein |
Protein accession | YP_562617 |
Protein GI | 91792966 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCGCC CTAGAAGAAG TCAGGTGAGT GTAGAAGATA CTCCCATGTA CCATTGTTGC AGCCGCGTAG TCAGAAGAGC CTATCTCTGC GGCGATGATA AATTCTCTGG CAAAAACTAT GACCACAGAC GGGGTTGGGT TGAAGCTCAA TTGCTTAAAT TGACAGAAGT ATTTGCCATC GACGTTGCGG CTTATGCCGT GATGAGCAAC CATTTGCATG TGGTGCTGAG TATCGACATT TATCAAGCCA ATCGCTGGAC AGGTATTGAA GTGATAAACC AGTGGCATCT GCTGTTTAAA GGCACTGATA TTACTAAAAA ATTTGCCAAG GGTGAAACCC TTGAAGATTA TGAAGTGCTA GAGCTTACCC ACACCATTGC CCTGTATCGC AGCCGTTTAA GCGATATTTC CTGGTTTATG CGAGCCTTAA ATGAGCCTAT CGCCCGCAGA GCCAATGAAG AAGATGAATG CACAGGGCGT TTCTGGGAAG GGCGGTTTAA ATCTCAAGCG TTACTCGATG AAGCCGCTGT ACTTGCCTGC ATGGTGTATG TTGACCTCAA TCCCATCCGC TCAAAGATAG CCAAAACCCC TGAAACCTCA GACTTTACCA GCATTAAACG CAGGATCACG GCCGCCTTAA ATGGCACTCA ACCCAAAGCA CTGCTGCCTT TTGTGGGCAA TGAGCGTAAA GACATGCCAA AAGGGCTCAC ATTTCATCTG AAAGACTATC TGCAATTGGT TGAAGATACG GGAAAAACAA TCCGAAATGA TAAAAGAGGC AGTATCAGCC CTAACAGTCA CAGCATCTTG AATCGACTCA ATATTCCTGC TGATAACTGG CTTAAAATCA TCAATGAATT TGGCAAGTTA TTCAAAGGCC CAGTAGGCAC ATTGCAAGAA CTCACCACAT ATTGTGAACA CCTTGAAAAA CGAAGGCGGC ATTACTGCCA CGCTTGCCAG TATATAGCAG CAAGTTAA
|
Protein sequence | MPRPRRSQVS VEDTPMYHCC SRVVRRAYLC GDDKFSGKNY DHRRGWVEAQ LLKLTEVFAI DVAAYAVMSN HLHVVLSIDI YQANRWTGIE VINQWHLLFK GTDITKKFAK GETLEDYEVL ELTHTIALYR SRLSDISWFM RALNEPIARR ANEEDECTGR FWEGRFKSQA LLDEAAVLAC MVYVDLNPIR SKIAKTPETS DFTSIKRRIT AALNGTQPKA LLPFVGNERK DMPKGLTFHL KDYLQLVEDT GKTIRNDKRG SISPNSHSIL NRLNIPADNW LKIINEFGKL FKGPVGTLQE LTTYCEHLEK RRRHYCHACQ YIAAS
|
| |