Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1529 |
Symbol | fadI |
ID | 4018002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1775842 |
End bp | 1777152 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637955539 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_562537 |
Protein GI | 91792886 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.962111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACA GACAACAGGT AAAGAATGCT CGCGGCGAAC GAATCGCGAT TGTTGCCGGC CTTAGAACGC CGTTTGCTAA ACAAGCGACA GCCTTTCACG GCGTCTCTGC CCTAGATATG GGCAAAATGG TGGTTAATGA GCTGATTTCT CGCTCTGAAC TTGACCCTAA ATTAATTGAG CAGTTGGTCT ATGGCCAAGT GGTGTTGATG CCAGCTGCGC CTAACATTGC CCGCGAAATT GTCCTAGGCA CTGGCATGAA TGTGTCAACC GATGCTTATA GCGTGACCCG CGCTTGTGCG ACCAGCTTCC AGTCTGCGGT TAACGTGGCT GAATCTATCA TGACTGGCAA TGTTGAAATC GGTATTGCTG GCGGCGCGGA TTCTTCATCT GTATTGCCTA TTACCGTGTC TAAGAAATTA GCCCATGCCT TGGTTGATTT GAACAAAGCC CGCACCCTAG GACAAAAATT TGCCATTATG CGCCGCCTTG GCCTTAAAGA TTTAATGCCA GTGCCGCCAG CGGTTGCAGA ATACTCGACC GGTCTTTCTA TGGGGCAAAC CGCCGAGCAA ATGGCGAAAA CTTACGGCAT TAGCCGCGCA GACCAAGATG CATTAGCTCA TCGCTCACAC ACGCTAGCCA CCGAAACATG GAATTCAGGT AATCTTCGTG ATGAGGTGAT GACGGCTCAT GTTGCCCCTT ATAAGCAGTT TATTGACCGC GATAACAACA TCCGCGAAAA CTCTGTACTT GAATCGTACG CTAAGCTTCG CCCTGCGTTT GACCGTAAGC ACGGCAGCGT GACAGCGGCA AACAGTACGC CGCTGACCGA CGGTGCATCA GCCATCATAT TGATGAGTGA AGGCCGTGCT AAAGCCTTAG GTTACCAGCC AATTGGCTAT ATCAAGAGTT ATGCTTTTAC CGCCATTGAT GTATGGCAAG ACATGTTGAT GGGCCCATCT TACGCGACGC CATTGGCGCT TAAGCGTGCC GGTATGGAGC TTGAAGACTT AACCTTGATT GAAATGCACG AAGCGTTTGC CGCGCAAACC TTAGCCAACA TGCAAATGTT TGGCTCGAAG AAGTTTGCCG CTGAAAAACT CGGTCGTAAT CGCGCAATCG GTGACATCGA CATGAGCAAA TTTAACGTCC TAGGCGGCTC GCTTGCCTAC GGTCACCCCT TTGCAGCCAC AGGTACCCGT CTTATCACCC AAGTGTGTCG CGAGCTTAAA CGCCGCGGCG GTGGTACTGG TTTAGCCACA GCCTGTGCGG CTGGTGGTTT AGGCGCAGCA ATGATAGTTG AAGTGGAGTA A
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Protein sequence | MSDRQQVKNA RGERIAIVAG LRTPFAKQAT AFHGVSALDM GKMVVNELIS RSELDPKLIE QLVYGQVVLM PAAPNIAREI VLGTGMNVST DAYSVTRACA TSFQSAVNVA ESIMTGNVEI GIAGGADSSS VLPITVSKKL AHALVDLNKA RTLGQKFAIM RRLGLKDLMP VPPAVAEYST GLSMGQTAEQ MAKTYGISRA DQDALAHRSH TLATETWNSG NLRDEVMTAH VAPYKQFIDR DNNIRENSVL ESYAKLRPAF DRKHGSVTAA NSTPLTDGAS AIILMSEGRA KALGYQPIGY IKSYAFTAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFGSK KFAAEKLGRN RAIGDIDMSK FNVLGGSLAY GHPFAATGTR LITQVCRELK RRGGGTGLAT ACAAGGLGAA MIVEVE
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