Gene Sden_1488 details

Gene Information

• Locus tag: Sden_1488
• ID: 4017257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1726028
• End bp: 1726726
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637955498
• Product: sporulation related
• Protein accession: YP_562496
• Protein GI: 91792845
• COG category: [S] Function unknown
• COG ID: [COG3147] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000050806
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCAGTC AATTTCAAAA TAGATTAGTG GGCACCATAG TCTTAGTGGC GTTAGGGGTA 
ATTTTTTTAC CTGATTTACT CGACGGAAAG CAACGTAAAG TGGAAGAAGT GTTTACCGAA 
ATTCCACTGC GTAGCCAAAG TCTGGCAAGA AATACGCAAG CAGAGTCAGA CCCGCAAGCT 
GAGCCGAGTC GAGGCGAGCA CTCCACCGTC GCTGCGGAGC AAGAGAAGTT TCAAGCTCTG 
AGTGCCGAGA GCACGCCTGC CCAGCAACAA TTGGAAGGCG CCTCACCACC GATCTCTAGC 
CTCAAGCCCA TTAAAATGGT CGATAGCTTA ACGGTCAGTG CCGCCGACAG CAAAAAATTG 
GCTCCAGCAG CGGTTAAATC GACTGAAAAA GCAAAAACAG CAGTGAAAAC TGTGAGTCGT 
CCCGAAGCCA GTCAGCCAAC AAGCCAGCCT CAGGCGAGTG TGACGCTGCA ACTGGGCGGG 
TTTAACAGTG CCGATAATGT GGTGGCTTTA GTGGCGCAAC TGCGTAAAGC TGGCTTTACA 
GCCTATACCT TGCCTCGTAA TCCTGTTGAT GGCCGTTTGA CCAAAGTGTT TGTTGGTCCC 
GATGTTTCTG AAGCTAAGCT GAAAATAAGG CAAGTTCAGA TAGAAAAGCT AACCGGGCTT 
AAGGGAAAGA TTGTTCCTTA CAATCCCCTT GAAAGATAA 

 

Protein sequence

MTSQFQNRLV GTIVLVALGV IFLPDLLDGK QRKVEEVFTE IPLRSQSLAR NTQAESDPQA 
EPSRGEHSTV AAEQEKFQAL SAESTPAQQQ LEGASPPISS LKPIKMVDSL TVSAADSKKL 
APAAVKSTEK AKTAVKTVSR PEASQPTSQP QASVTLQLGG FNSADNVVAL VAQLRKAGFT 
AYTLPRNPVD GRLTKVFVGP DVSEAKLKIR QVQIEKLTGL KGKIVPYNPL ER