| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1483 |
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| Symbol | |
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| ID | 4017720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1715909 |
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| End bp | 1717045 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955493 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_562491 |
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| Protein GI | 91792840 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000308199 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG TTGCCGATGA GAATATGCCT TTCGTTGAAG CCTTATTTGG CGGGCTTGGG
GACGTGGTCA GAGTCAATGG CCGCAGCTTA AGCGCCAAAG ATTTAAAGGA TGCCGATGTG
CTCTTGGTCC GCTCTGTGAC TAAGGTCAAT CAAACCTTGT TGCAAGACTG CCAGTCTCTT
AAGTTTGTTG GCAGCGCCAC CATAGGCACA GATCATATCG ACCAAGCATA CCTTAAGCAT
CGAGGGATCC CCTTTGCCAA TGCCCCAGGT TGCAACGCCA CAGGTGTGGG TGAATACGCC
TTTATTGCCG CCTTGGAGTT GGCGCAACGG GAACAGGTTA ACCTTAAAGA CAAGGTCATT
GGCATAGTCG GCGCGGGGAA TACTGGCATG GCCGCGGCCA AGTGTTTTGC CGCCTTTGGT
AATAAGGTGT TGGTTTGCGA TCCATTTAAA ACCCAAGACA TGCTCTATTT CCCCCTTGTT
GGCCTGGATG AGCTCATTCA ACAAGCCGAT ATCATCAGTC TGCATGTGCC ATTGAGTGAC
AATGGGCCCT ATAAAACCTG GTATTTATTT GATGAAGCCC GCCTCGAGTC ATTAACGCCC
AATACCTGGC TGTTTAACTG CTGTCGTGGT GAGGTGATAG ATAATCGCGC ATTAATTGAA
TTTAAGCGGC GCCGTGATGA TATAAAGCTG GTGCTCGATG TGTGGCAGGG TGAGCCTCAT
CCTATGGCAG AACTTGTGCC CTTAACTGAG TTTGCTACCC CGCACATTGC CGGTTACAGC
TTAGAGGGTA AGGCCAGAGG CACTTTTATG CTGTATCAGG CGTTGGCCAC GAGTTTAAAT
TTGCCTGTTA AGGCGTCTTT GCAATCACTA TTGCCCAGTC ACTTTGTGAA CCAATTGGGT
TTAGCTAGCC AAACTGAGCT GACCCAAGGG CAACTGCTAA GCCTTGCAAG GCTAGTGTAC
GATCTTCGAG ATGATGATAA AAATTTCAGA CAAGCGTTCG ATAAAACGAA TGGTTTTGAC
CAATTGAGAA AAAATCATAC CCATAGACGC GAATTTAGTG CATTGACCCT AGCATCTAGC
GGCGGTTGTG AGGTAAATTG GCTCACAAAA CTAGGGTTTT CAGGAGTTGG ACGTTAA
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| Protein sequence | MKIVADENMP FVEALFGGLG DVVRVNGRSL SAKDLKDADV LLVRSVTKVN QTLLQDCQSL
KFVGSATIGT DHIDQAYLKH RGIPFANAPG CNATGVGEYA FIAALELAQR EQVNLKDKVI
GIVGAGNTGM AAAKCFAAFG NKVLVCDPFK TQDMLYFPLV GLDELIQQAD IISLHVPLSD
NGPYKTWYLF DEARLESLTP NTWLFNCCRG EVIDNRALIE FKRRRDDIKL VLDVWQGEPH
PMAELVPLTE FATPHIAGYS LEGKARGTFM LYQALATSLN LPVKASLQSL LPSHFVNQLG
LASQTELTQG QLLSLARLVY DLRDDDKNFR QAFDKTNGFD QLRKNHTHRR EFSALTLASS
GGCEVNWLTK LGFSGVGR
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