Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1449 |
Symbol | |
ID | 4017758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1687579 |
End bp | 1687983 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955459 |
Product | hypothetical protein |
Protein accession | YP_562457 |
Protein GI | 91792806 |
COG category | [S] Function unknown |
COG ID | [COG4628] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000155456 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGC AAAATAATCC TTTACATGGC CTAAAACTGG AGGCCATCTT AATATTTTTG GTGGATAAAT ACGGTTGGGA AGAGTTAGGT CTTAGGATTA ACATTCGCTG CTTCACGCAC GATCCTAGCA TCAAATCCAG CTTGGCCTTT TTACGAAAAA CCCAATGGGC CAGAGATAAG GTTGAATACC TATATTTAAA AGCCAATAAA CTGCCATTGC CTACCCCTAA GGTTGACTCT GGCGGAACCA ACAAATTTGA CGACAAGCCT AAAAAAGCCC AGCACTCCTC GGGTTCTCTA GCGGGGCAAG CTAAGCCACA AACCAAGCAG ACAGCAAATC ATACTGACGC CTTGCCTCAG GCAAATAAAG CCATATGGGG TAATGCCAGC CCTAAGGGTG ATTAA
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Protein sequence | MNQQNNPLHG LKLEAILIFL VDKYGWEELG LRINIRCFTH DPSIKSSLAF LRKTQWARDK VEYLYLKANK LPLPTPKVDS GGTNKFDDKP KKAQHSSGSL AGQAKPQTKQ TANHTDALPQ ANKAIWGNAS PKGD
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