Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1415 |
Symbol | |
ID | 4017440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1651345 |
End bp | 1651845 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955423 |
Product | hypothetical protein |
Protein accession | YP_562424 |
Protein GI | 91792773 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00105973 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTTAC TCAATGGCTA TAGCGCCAGC GTTATCGAGC AAGTTCAACG GCATATCGAA GACAACAGCT TGGCTAGTTT GTTGTTGTCA CGTCACCCCG TCATTCACGA CGTTCGCACC GACAAGGCCC TGTATGACTA TACACTCGGC TTTAAAAATC AGTTTATGCG CCAGTCAGAT CCTTTGGCCA AGGTGATATA TGATGAAAAA ATCACCTTAA CTCACCAAGC CTTAGGTCTA CATTCTTTTG TTAACCGTGT ACAAGGCAAT AAGGTCAAAG CCAAGAATGA AATTCGTATT TCATCAAGGC TTAAACGCAT TCCAGAACCA TTATTGCGTA TGGTCGTCAT TCACGAATTG GCGCATTTGC GAGAAAAAGA GCACAACAAA GCCTTCTACA AGCTGTGCGA GTTTATGCTC AGTGATTACC ATCAATTGGA ATTTGATCTT AGGCTACTGC TTATCTGTGA ACAACTCGGG CAATCGCCTT ATGAAGCTTG A
|
Protein sequence | MRLLNGYSAS VIEQVQRHIE DNSLASLLLS RHPVIHDVRT DKALYDYTLG FKNQFMRQSD PLAKVIYDEK ITLTHQALGL HSFVNRVQGN KVKAKNEIRI SSRLKRIPEP LLRMVVIHEL AHLREKEHNK AFYKLCEFML SDYHQLEFDL RLLLICEQLG QSPYEA
|
| |