| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1396 |
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| Symbol | |
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| ID | 4017359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1626618 |
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| End bp | 1627403 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955398 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_562405 |
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| Protein GI | 91792754 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000108782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATATG CCTTAATCGT TGCGGCGATA ATCTGTGGTA TCGGCACGGC TATGGCTGCA
CCAGCACCAG TTGATGATTT GTATGGTGGC TCGAGCGATG AGCGTTTAGC GAAATTAGAA
CGCATCCTGA AAGCAAGACA ACAAAATGAT TTTGATATGC AGCGCCGCTT AGACACACTT
CAAAATGAAG TGTTAGAATT GCGTGGTATA ACAGAACAAC AAAATTATCA GATAAATCAG
ATGCTACAAC GCCAGCGTCA GCTTTATGAA GAAATCGCCG CTGTGTCGGT CAAATCGACC
ACGCCAGTTA GCGCCCCATC AGGCACGAGT GTCACGACAA GTACAAGTGT TGCATCAAAT
ACCGCTTCAA ATGTACCAGT AGTAGCTGAA TCTATGACCT CTAGCTTAGA TGAGACTGGC
AGTTACGAGC GAGCGGTAAA CTTAGTATTA AAAGAGCGTC AATACGATGC TGCGATCCCC
GCATTTCGCG AATTTATCAA GCAATATCCA GATTCTGCCT ATGCGCCTAA TGCCAATTAT
TGGTTAGGCC AATTGCTCTA CAATAAAAGT GATTATGAAA GCGCTAAGCA AGCGTTTAGC
ACAGTGGTGA GTAAGTACGC AGATTCGAGT AAACGTGCTG ATAGTTTAGT TAAACTGGGT
ATGATTGCCG AGAAATCTAA TGACAATAAT GGTGCTAGAG CACTGTATAA TAAAGTGCTA
AAAGAATACG CAAATAGCGC ATCTGCTAGG CTTGCACAGC AGCAGTTATC AGCCTTAAAA
GGCTAA
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| Protein sequence | MRYALIVAAI ICGIGTAMAA PAPVDDLYGG SSDERLAKLE RILKARQQND FDMQRRLDTL
QNEVLELRGI TEQQNYQINQ MLQRQRQLYE EIAAVSVKST TPVSAPSGTS VTTSTSVASN
TASNVPVVAE SMTSSLDETG SYERAVNLVL KERQYDAAIP AFREFIKQYP DSAYAPNANY
WLGQLLYNKS DYESAKQAFS TVVSKYADSS KRADSLVKLG MIAEKSNDNN GARALYNKVL
KEYANSASAR LAQQQLSALK G
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