Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1392 |
Symbol | |
ID | 4017355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1623244 |
End bp | 1623672 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955394 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_562401 |
Protein GI | 91792750 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000255119 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAGC GTAAACGTCG CCGTCCGGTT GCTGAAATTA ACGTTGTTCC TTATATCGAC GTGATGTTGG TGCTATTAAT CATCTTTATG GTGACAGCAC CTATTGTGTC TCAAGGCGTT AAAGTTGATT TACCTCAAGG TTCGGCTGAG CCTTTACCAC AAGACAGTAA GCCTCCGATT GTGGCATCTA TCGATGCCGC GGGAGATTAT TTTGTTAATA TTGGTGAAGG CTCTAACAGC CAAATAATGG ATTTGACAGA GGTAACCCAA GAGGTTGCTG CAGCATTGCT CATTGCGCCA GAAAGGCCAG TCGTCGTAAA AGGTGATAGA AGTATTCCCT ACGAAAAAGT AATCCAACTC ATGGTCAGTT TGCAAAAAGC AGGGGTACCA TCGGTGGGCT TGATGACTGA TTCATTTGAG GAGAACTAG
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Protein sequence | MYQRKRRRPV AEINVVPYID VMLVLLIIFM VTAPIVSQGV KVDLPQGSAE PLPQDSKPPI VASIDAAGDY FVNIGEGSNS QIMDLTEVTQ EVAAALLIAP ERPVVVKGDR SIPYEKVIQL MVSLQKAGVP SVGLMTDSFE EN
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