Gene Sden_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1383 
Symbol 
ID4017746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1606037 
End bp1606594 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID637955380 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_562392 
Protein GI91792741 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000311107 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA AGAAAGCCGT ATTTTTAGAC CGTGATGGGG TTATCAATAA AGACACTGGG 
TACGTTCACC TTGTTGATGA TTTTGTATAT ATAGAAGGCG TATTTGATGC TTGTCTTGCA
CTAAAGAAGA TGGGCTATCT ATTGGTCGTG GTGACTAATC AGTCCGGTAT CGCCCGCGGC
ATGTACAGTG AAGATGAATT TCATTCATTA ACTGAGTGGA TGGACTGGAA CTTTGCCGAC
AAAGGCGTTG AGCTTGATGG GATCTATTAC TGTCCCCATC ATAATGAGAA AGGCATAGGC
GAATATAAGC ACGATTGTGA TTGCAGAAAA CCTAAGCCAG GTATGCTGAT AGATGCCGCG
CAGTTTTTAA ATATCGATTT AAGCCAGTCT GTGATGGTGG GTGACAAGGC CGATGATATG
CGCGCCGCCA TTGCTGCGGG TGTTGGTACA TCAATTCTGG TACGCAGCGG TAAAACGGTC
GATGATGCTG GAATCGAACT TGCGACTAGA GTAGTAGACA GCATTGCCCA TGTGCCAGAC
TACTTAGCCA GTCGCTAG
 
Protein sequence
MKVKKAVFLD RDGVINKDTG YVHLVDDFVY IEGVFDACLA LKKMGYLLVV VTNQSGIARG 
MYSEDEFHSL TEWMDWNFAD KGVELDGIYY CPHHNEKGIG EYKHDCDCRK PKPGMLIDAA
QFLNIDLSQS VMVGDKADDM RAAIAAGVGT SILVRSGKTV DDAGIELATR VVDSIAHVPD
YLASR