| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1297 |
|---|
| Symbol | |
|---|
| ID | 4017585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1519120 |
|---|
| End bp | 1519566 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637955294 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_562306 |
|---|
| Protein GI | 91792655 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3018] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAA CTATTTTGCT TGTCTGCGTT TTATTATCCG CTTGTTCTTC TGGTGACAGG
TATGTTCAAT GGGAAACTGA AGCCCCATCA AACTTTCCTA AATTGACTGC CATTGGCTAT
GCGCCACTGG CAACTCAGCC CTCAGATAGT CAAGCTCACA GAGTGCTAAT GGCAATGCAA
GCATCTAAAG TCGTGGCATA TCGTGAATTA GCTGAGCAAG TGTACGGTCA AAAGATCACC
GCGAACTCAA GTGTGAGTGA TTGGTTGCTA ACAGATGATA ATGTAAAGGC CAATGTCTCT
GGATTAATCC GTGGTGCTAA GGTGGTGAAA AGTTATCCGT CTGGCGAGCA TTACGTCACT
GAATTGGAGC TAGACTTCTC TCTTGTTTGG GCGTTATACG AACAGCAAAA TCGCCCTAAA
AAAGTGAAAG ATGTTACCTA CTTTTAG
|
|---|
| Protein sequence | MRLTILLVCV LLSACSSGDR YVQWETEAPS NFPKLTAIGY APLATQPSDS QAHRVLMAMQ
ASKVVAYREL AEQVYGQKIT ANSSVSDWLL TDDNVKANVS GLIRGAKVVK SYPSGEHYVT
ELELDFSLVW ALYEQQNRPK KVKDVTYF
|
|---|
| |